Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq2769 136 3e-27 >seq2769 Length=42269 Score = 136 bits (150), Expect = 3e-27 Identities = 237/342 (69%), Gaps = 2/342 (1%) Strand=Plus/Plus Query 30116 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30175 || |||||||| |||| || | ||| |||||||| ||||| | |||||| | | Sbjct 4512 TTCGGGTTCCACGCGCTCAGCACGATCCGCCTGTCCGTCGGGTTCTCCCTGATCTTGCGC 4571 Query 30176 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTA 30234 ||| | | ||||| ||||||||| |||| || || || | || |||| ||| Sbjct 4572 ACGACCTCCGCGAGCTGGTCCACCCCCTGGCCCGCATAATCGTCCTCGCACGTCCC-GTA 4630 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 | || || ||||||| |||||| |||||||||||||| |||||||| ||||| || Sbjct 4631 CGGAGCGCCAAAATGCCGCCACTGAAACCCGTACACCGGCCCCAGGTCGCCCTCGCGCCG 4690 Query 30295 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 30354 || | | |||| ||| | | || ||| |||||| | |||||||| || || Sbjct 4691 ATGACCAAGGCCCACGCGGTCGAGGTACTCCCTGCTGCCGTTGCCTTCCCAGATATTCAC 4750 Query 30355 CCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30414 ||||| | | |||| ||| || ||| |||| || |||||||||||||||||||| Sbjct 4751 CCCCTGCGCGCTGAGCCGCTTGCCGTCCGTGCACCCGCTCACGAACCACAGCAGCTCCTC 4810 Query 30415 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||| | | || || | |||||||||||| || || Sbjct 4811 CCATACGCCGCGCAGGAACACGCGCTTGGTCGTGAGCAGCGG 4852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406293058418184