Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2769 141 8e-29 >seq2769 Length=42269 Score = 141 bits (156), Expect = 8e-29 Identities = 242/347 (70%), Gaps = 8/347 (2%) Strand=Plus/Plus Query 6780 CCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGT 6839 |||||||||||||||||| || |||||||| ||||| ||||| || | | | | Sbjct 4510 CCTTCGGGTTCCACGCGCTCAGCACGATCCGCCTGTCCGTCGGGTT---CTCCCTGATCT 4566 Query 6840 CGATCACGTACTGC---AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCC 6896 | |||| || | ||||||||| | ||||| |||| ||| || | |||| | || Sbjct 4567 TGCGCACGACCTCCGCGAGCTGGTCCACCCCCTGGCCCGCATAATCGTCCTCGCACGTCC 4626 Query 6897 GATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCT 6956 ||| || ||||| || | |||||| |||||||| ||||| |||| ||||||||| Sbjct 4627 CGTACGGAGCGCCAAAATGCCGCCACTGAAACCCGTACACCGGCCCCAGGTCGCCCTCGC 4686 Query 6957 CCCGA-GATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 |||| || ||| ||| ||| || | || | |||| | |||||||| Sbjct 4687 GCCGATGACCAAGGCCCACGC-GGTCGAGGTACTCCCTGCTGCCGTTGCCTTCCCAGATA 4745 Query 7016 TTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGC 7075 ||||||||| | | |||| |||| || |||| ||| |||||||||||||||||| Sbjct 4746 TTCACCCCCTGCGCGCTGAGCCGCTTGCCGTCCGTGCACCCGCTCACGAACCACAGCAGC 4805 Query 7076 TCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 ||||| ||||| | | |||| || || ||||| |||||||| Sbjct 4806 TCCTCCCATACGCCGCGCAGGAACACGCGCTTGGTCGTGAGCAGCGG 4852 Score = 141 bits (156), Expect = 8e-29 Identities = 242/347 (70%), Gaps = 8/347 (2%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 |||||||| ||||| || || |||| | | ||||| |||||||||||||||||| Sbjct 4852 CCGCTGCTCACGACCAAGCGCGTGTTCCTGCGCGGCGTATGGGAGGAGCTGCTGTGGTTC 4793 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 ||||| ||| |||| || |||| |||| | | ||||||||| |||||||| | Sbjct 4792 GTGAGCGGGTGCACGGACGGCAAGCGGCTCAGCGCGCAGGGGGTGAATATCTGGGAAGGC 4733 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATC-TCGGGAGGAGGGCGACTT 34401 |||| | || | || ||| ||| ||| || |||| ||||||||| | Sbjct 4732 AACGGCAGCAGGGAGTACCTCGACC-GCGTGGGCCTTGGTCATCGGCGCGAGGGCGACCT 4674 Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGC 34461 ||| ||||| |||||||| |||||| | || ||||| || ||| || | |||| | Sbjct 4673 GGGGCCGGTGTACGGGTTTCAGTGGCGGCATTTTGGCGCTCCGTACGGGACGTGCGAGGA 4614 Query 34462 GGACTATTCGGGACAGGGAGCGGACCAGCT---GCAGTACGTGATCGACACCTTGAAGCG 34518 || ||| |||| ||||| | ||||||||| | || |||| | | | | | || Sbjct 4613 CGATTATGCGGGCCAGGGGGTGGACCAGCTCGCGGAGGTCGTGCGCAAGATCAGGGAG-- 4556 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565 ||||| ||||| |||||||| || |||||||||||||||||| Sbjct 4555 -AACCCGACGGACAGGCGGATCGTGCTGAGCGCGTGGAACCCGAAGG 4510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448242777313440