Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3392 100 4e-16 >seq3392 Length=91092 Score = 100 bits (110), Expect = 4e-16 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || || ||||||||||| || || || || || ||||| || || | |||| Sbjct 44526 TCGTTGGAGAAGGTAAGACCGGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCG 44585 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| ||||| || ||||| || || ||| | || | ||| || | Sbjct 44586 AACGAGCCGGAGAAGAAGATGCCCTCGACGGCAGCGAAAGCGATGAGGCGCTCGGCGAAG 44645 Query 48303 CTGGCTTCGTTGT--GT-ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| | | ||| || |||||| | ||||| || ||||||||||| | ||| || Sbjct 44646 GTGGATCGGGTGTCCGTGATCCACTTGAGAGCCCACTCGGCCTTCTTCTTGATACACGGG 44705 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGTT 48388 || || || || || | ||||| |||| Sbjct 44706 ATGGTGTCGATGGCCTCGAAGAGGTAGTT 44734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694638390873280