Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1820 123 6e-23 >seq1820 Length=19797 Score = 123 bits (136), Expect = 6e-23 Identities = 161/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| || || || ||||||||||||||||||||||||| | || | Sbjct 356 GAGACGGAGCACAAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAATCGGAAAGTGTACG 297 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | |||||||| | || ||| || || Sbjct 296 GCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGCGGGATGCCCTC 237 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGA 152063 ||| || || || || |||||| | || | | |||| || |||| ||||| || Sbjct 236 CTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGGACTCG--ACTTCGAGG 179 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || ||||||||||||| |||||| Sbjct 178 GTGATCGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 138 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || ||||| ||||| || |||||||| ||||||||||| |||| | || | Sbjct 583 AGTCGAAGTACAAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 524 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || ||||| | || || |||||||| || | |||||||| | || || || || Sbjct 523 CCGTCTTCCAACTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGCGGAATACCCTCT 464 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || ||| || || | || | |||| || || || || ||||| Sbjct 463 TTATCCTGGATCTTTGCCTTCACGTTGTCGATAGTGTCAGATGATTCGACCTCGAGAGTG 404 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || || |||||||||| |||||| Sbjct 403 ATGGTCTTGCCGGTAAGCGTTTTCACGAAGATCTGCAT 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153769028781842