Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5859 120 6e-22 seq14919 91.5 3e-13 >seq5859 Length=97331 Score = 120 bits (132), Expect = 6e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || ||||| |||||| | |||| ||| | ||||| ||||| || || ||||| || | Sbjct 76364 CTCATTGGGATGAACTCAAAACTCATGTGCCAGTATATCGAGTTTGTTGCCGATCGTCTC 76423 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 |||| ||||||||| |||| || ||||| | | |||||| |||| || ||||| Sbjct 76424 CTTGTCGCACTTGGTAACGACAAGGTGTATGATGTGACGAACCCTTTTGACTTCATGGAC 76483 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 | || |||||||| ||||||||||||||||| || |||||||| Sbjct 76484 ATGATCTCGCTTCAGGGGAAGACCAACTTCTTTGAGAAGCGTGT 76527 >seq14919 Length=17298 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 319810 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 319869 ||||||| |||||||| ||||| ||| | |||| | || ||||| ||||| Sbjct 8251 CCGTCGATGTCGTGTTCAACGTAGAAAGTGCGAACCTCATCAGGCGATGGGAAGCCTTCG 8192 Query 319870 AGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACAC 319929 | ||||||||| ||||| | ||| || || || ||||| | ||||| |||||| Sbjct 8191 ACTTGGCCGTTCGTGATAGCCCTCATGAGTGTCGACTTACCGGTTCCGTTCTTACCACAC 8132 Query 319930 AGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTG---TTGTTCAGAAGAATTTTT 319986 |||||||| |||| |||||||| || || | ||| |||| || ||||| || Sbjct 8131 AGACCGTAACGGTGGCCGCGTTTTAGACGGA---GGGTGGCAGTGTTAAGGAGAATCTTG 8075 Query 319987 CCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACCGACTTC 320036 |||| || |||| || |||| ||| | || ||||| || || |||| Sbjct 8074 GCACCGTAAGCCAAGGAGAATTGACAGTTGCAAAGATCTTCGCCTTCTTC 8025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056619322260920