Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq5859 192 6e-44 >seq5859 Length=97331 Score = 192 bits (212), Expect = 6e-44 Identities = 393/579 (68%), Gaps = 5/579 (1%) Strand=Plus/Minus Query 16943 TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATA 17002 |||||||| | |||| || || |||||||| || | ||||| || | |||||| Sbjct 76221 TTAAGATGACTGAACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATA 76162 Query 17003 AGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCG 17062 || ||||| ||||| ||||| || ||||| || || ||||| ||||| || || | Sbjct 76161 AGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGAC 76102 Query 17063 GCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCG 17122 ||||| || ||||| || || || || ||||| | || || || | || ||||| || Sbjct 76101 GCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCG 76042 Query 17123 TACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182 | |||| | ||||| ||||| | | |||| || || ||| ||||||| || Sbjct 76041 AATGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAG 75982 Query 17183 TCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGT 17241 || || || ||||| | || | | ||| |||| || | || | || || || Sbjct 75981 GGAATGGTCTCGATGGCGTCGAAAAGATATTCTCGTTCC-GTGGCATCTTTGATGTAAGT 75923 Query 17242 ATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTA 17301 |||||||||||| ||| | |||||||| ||||| ||||| || || || ||||| Sbjct 75922 GTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTA 75863 Query 17302 AAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTT 17361 || || || |||||||| | ||| ||||| | || | || || || || || Sbjct 75862 GAAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATT 75803 Query 17362 CACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC 17421 || || || || ||| ||||| ||||| | | ||| ||||||| ||||| Sbjct 75802 AACTATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTT 75743 Query 17422 --CGGTGTAA-GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGT 17478 || || | | | ||||||| | || ||| ||||| | ||||| ||||||| ||| Sbjct 75742 GTCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGT 75683 Query 17479 CCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 |||||| |||| |||||||||||||||| | ||| || Sbjct 75682 CCAAAACGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 Score = 174 bits (192), Expect = 2e-38 Identities = 364/539 (68%), Gaps = 9/539 (2%) Strand=Plus/Plus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 ||||| || | || ||||| || ||||| |||||||| || ||||| |||||||||| Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || ||||||||||| || ||||| || || || || ||||| || || || | ||||| Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 || || | || || || | | | | || || ||||||||| | |||| ||| Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTCG 74314 Query 17165 GCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGT 17224 ||||| ||||| | ||| || ||||| || |||| || | | || || Sbjct 74315 GCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGATGA 74374 Query 17225 AGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTC---C 17281 | || | | || ||||| || || | || |||| || |||||||| || | Sbjct 74375 GGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTCGATC 74434 Query 17282 ATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAAT 17341 ||| || |||||||| || ||||| |||||||| || | |||||||||| | ||| Sbjct 74435 ATGACT---TGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAAAT 74491 Query 17342 CGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGC 17401 | ||| || ||||| || || ||||| ||| ||| |||||||| || | ||||| Sbjct 74492 CTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATATGA 74551 Query 17402 TTAATGAAATATTTTTCGTCCG-GTGTA--AGAACGCGCCAGTCCTTTAAATCTTTGGAT 17458 || ||||| |||||| | || || || ||||||| | | ||| | || Sbjct 74552 GAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGTGAA 74611 Query 17459 ATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 | |||| |||||| | ||||||||| ||| |||| || || |||| | |||||| Sbjct 74612 AGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACAGCTGCCAAAT 74670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516970580961120