Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5859 154 2e-32 >seq5859 Length=97331 Score = 154 bits (170), Expect = 2e-32 Identities = 350/524 (67%), Gaps = 3/524 (1%) Strand=Plus/Plus Query 16235 CTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAAT 16294 || ||||| || || || || || || || ||||| |||||||||||| ||||| ||| Sbjct 74147 CTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTCTTCAACCAAAAT 74206 Query 16295 ATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGT 16354 || || || ||||| || || || ||||| || ||||| | ||||| || || | || Sbjct 74207 ATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAATGCTATGAGGCGC 74266 Query 16355 TCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTT 16414 ||||| | | | | || | ||||||||| | |||| |||||||| || || Sbjct 74267 TCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTCGGCTTTGTGCTTG 74326 Query 16415 ATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATA 16474 | |||| || ||||| || |||| || | | || ||| ||| | | Sbjct 74327 ACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGATGAGGATCTTTGACG 74386 Query 16475 TACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAAT 16534 || |||||||| || ||| || |||| || |||||||| || || | |||||| Sbjct 74387 TATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTCGATCATGACTTGAAAT 74446 Query 16535 CCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTC 16594 ||||||||||| || || || || | ||| |||||| |||||| ||| ||||| Sbjct 74447 CCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAAATCTTTCAATAAGGTTT 74506 Query 16595 TCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTT 16654 ||||| || || || || || || ||||| || | || || || ||||| | Sbjct 74507 TCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATATGAGAGATAAAATAACGT 74566 Query 16655 TCGTCAG-ATGTA--AGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCT 16711 ||||||| | || || | | ||| || | | ||| | || | |||| ||||||| Sbjct 74567 TCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGTGAAAGGTCCAATTCTTCT 74626 Query 16712 GGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 | |||||||| ||| |||| || || |||| | |||||| Sbjct 74627 GCGGTCCAAAATGATGCCTCTGCTTTCTTGTACAGCTGCCAAAT 74670 Score = 149 bits (164), Expect = 6e-31 Identities = 427/654 (65%), Gaps = 11/654 (2%) Strand=Plus/Minus Query 16109 GTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA----TCGGTGGCTCGTGT 16164 || || |||| ||| || || |||||||||||| | |||||| || | ||| | Sbjct 76293 GTCAAGAATTCTTGCTCGATGACAACCGCTTCTGTGATGATAAACTTCACAGTGTCGGGA 76234 Query 16165 TTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCC 16224 | | ||||| | || || || | |||| | |||||||| || || | || Sbjct 76233 TGCGGACGGCGC----TTAAGATGACTGAACAGCAAGCACGCGAAATCTGTGTGCATACC 76178 Query 16225 TTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTT 16284 || || | |||||||| ||||| ||||| || || || ||||| || || ||||| Sbjct 76177 CTCATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTT 76118 Query 16285 TAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 |||||||| || | || ||||| || || || || || || || |||| || || || Sbjct 76117 CAACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGC 76058 Query 16345 GATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGC 16404 | || ||||| || | || | || ||| | ||||| | | |||| || || Sbjct 76057 CACCAACCGTTCACCGAATGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGC 75998 Query 16405 TTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAAT 16464 ||| | |||||||| || || || ||||| | || | | ||| |||| Sbjct 75997 CTTTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAAAAGATATTCTCGTTCCGTGGC 75938 Query 16465 ATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGC 16524 ||| | || || || || || |||| ||| | || ||||| ||||| || || Sbjct 75937 ATCTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCAT 75878 Query 16525 TATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTC 16584 || || || || ||||| || || || ||||| | ||| ||||| |||| | || Sbjct 75877 AATTTGGAAACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTC 75818 Query 16585 CGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAAT 16644 ||||||||||| || || || ||| || || || ||||| | | || || Sbjct 75817 AAGGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGAT 75758 Query 16645 GAAATATTTTTCGT--CAGATG-TAAGAATATGCCAATCTTTTAAATCTTTGGATATATC 16701 ||||| ||||| | || | | | ||||| || | || ||| ||||| | ||| Sbjct 75757 GAAATGACGTTCGTTGTCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATC 75698 Query 16702 CACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || ||||| | |||||||| |||| |||||||||||||||||| ||| || Sbjct 75697 CATCTCTTCGGCGGTCCAAAACGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510846193030880