Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq5859 232 7e-56 seq9834 127 2e-24 seq14965 93.3 4e-14 seq68235 87.8 2e-12 >seq5859 Length=97331 Score = 232 bits (256), Expect = 7e-56 Identities = 446/646 (69%), Gaps = 19/646 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| |||||||| ||||| ||||| ||||||| ||| ||| |||| || Sbjct 75644 ATATGGCAAATGTATAAAAAGGCAGAGGCTTCGTTTTGGACCGCCGAAGAGATGGATCTT 75703 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| |||||| | || | ||||||||||| || ||||||||| Sbjct 75704 TCCAAGGATCTACATGACTGGCACAACCGTCTCAACGACAACGAACGTCATTTCATCTCT 75763 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || || || ||||| || || || || || || ||||| || | ||| | Sbjct 75764 CATGTTCTCGCGTTCTTCGCAGCGTCTGATGGGATAGTTAATGAGAACCTCCTTGAGAGG 75823 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || | | || || || || || || ||||| || |||||||| || || || ||| Sbjct 75824 TTTTCAAACGAAGTCCAAGTTGCGGAAGCGCGTTGTTTCTACGGTTTCCAAATTATGATG 75883 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGC--GCT-CTTCG 116929 || ||| | ||||| || | || || ||||||||||| ||| | | | | || Sbjct 75884 GAAAACATTCACTCCGAGACCTACTCCCTACTCATCGACACTTACATCAAAGATGCCACG 75943 Query 116930 GAG-GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG-AAGG 116987 || ||||| || || | ||||||||||||| || || || | |||| | |||| Sbjct 75944 GAACGAGAATATCTTTTCG----ACGCCATCGAGACCATTCCCTGTAT-AAAGCGAAAGG 75998 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 | || ||||| ||||| ||||| ||| || | | | | ||||| || || |||||| Sbjct 75999 CTGACTGGGCCCTGCGGTGGATATCCGACAAACATTCGACATTCGGTGAACGGTTGGTGG 76058 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 ||||||| || ||||| ||| |||| || || || ||||| |||| || ||| | | Sbjct 76059 CCTTCGCCGCTGTCGAAGGCATCTTTTTCTCTGGATCATTCGCGTCCATCTTCTGGTTGA 76118 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGACGA 117165 |||| || || |||||||| ||| |||| ||||| |||||||| ||| | || || Sbjct 76119 AGAAGCGTGGTCTCATGCCTGGCTTGACCTTTTCA--AACGAGCTTATCAGTCGCGATGA 76176 Query 117166 GGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCG 117224 |||| |||| || || || || |||||||||| ||| | || || ||| | | Sbjct 76177 GGGTATGCACACAGATTTCGCGTGCTTGCTGTTCAGTCATCTTAAGCGCCGTCCGCATCC 76236 Query 117225 CGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCA 117270 || | | || | | ||| |||| || ||||| | ||||||||| Sbjct 76237 CGACAC-TGTGAAGTTTATCATCACAGAAGCGGTTGTCATCGAGCA 76281 >seq9834 Length=29888 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| || || || ||||||||| | || ||||| | | Sbjct 369 ATGCAAATCTTCGTCAAGACGCTGACAGGAAAGACCATCACCCTTGAGGTCGAGTCTTCG 310 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || || || | || || Sbjct 309 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCA 251 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | || | ||| ||||| ||||| || || | ||||| ||| || ||||| Sbjct 250 GCAACGCTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACTCTCTCTGATTACAA 191 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | || || ||||| || ||||| || | |||||| Sbjct 190 CATCCAGAAGGAGTCTACCCTTCATCTCGTTTTGCGTCTGCGTGGCGGC 142 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 |||||| | |||||||| || ||||||| ||| || || ||||| || || | ||| || Sbjct 492 ATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAGCTAGAGGATGGGCGTACT 433 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||| || |||||||||||||| ||| | || || ||||| || |||||| Sbjct 432 CTCTCTGATTACAACATCCAGAAAGAGTCAACCCTCCATCTTGTCTTGCGC 382 >seq14965 Length=33111 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || || |||||| |||| || ||| | | Sbjct 8277 ATGCAGATCTTCGTGAAGACATTGACAGGGAAGACTATCACCCTCGAAGTGGAATCATCA 8218 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || | | | || || || || ||||| |||| || Sbjct 8217 GACACCATCGACAACGTTAAAGCGAAGA-TCCAGGATAAGGAAGGTATCCCTCCGGATCA 8159 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || || || || |||| |||| ||||||||| |||||||| Sbjct 8158 GCAGCGTTTGATCTTTGCCGGGAAGCAATTGGAGGACGGGCGCACCCTTTCAGACTACAA 8099 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| | || |||||||| || Sbjct 8098 TATCCAGAAGGAATCAACACTGCATCTTGT 8069 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | ||||| || || ||||| | || || || | | Sbjct 8049 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTAGAGTCTTCG 7990 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||||| || |||| ||||| ||||| || || | ||||| Sbjct 7989 GACACGATTGACAATG-TCAAGGCGAAGATTCAAGACAAGGAGGGTATTCCACCCGACCA 7931 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||| | ||| || || || |||| |||| ||||||||| || || || Sbjct 7930 GCAACGTCTCATTTTCGCTGGGAAGCAATTGGAAGACGGGCGCACCCTTTCTGATTATAA 7871 Query 40869 CATCCAGAAGGA 40880 |||||||||||| Sbjct 7870 CATCCAGAAGGA 7859 >seq68235 Length=344 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 ||| |||| ||||| ||||||||||| | |||||||| || | |||| || || || Sbjct 1 AAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTTGCTGGTAA 60 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || |||| ||||| || |||||| ||||| ||||||||| |||| || || Sbjct 61 GCAACTCGAGGACGGTCGCACTCTTTCCGACTATAACATTCAGAAGGAGTCCACTCTTCA 120 Query 40893 TCT 40895 ||| Sbjct 121 TCT 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514646765707840