Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9834 98.7 9e-16 seq11775 93.3 4e-14 seq14965 89.7 4e-13 seq14872 84.2 2e-11 >seq9834 Length=29888 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || ||||||||||| | |||||| ||| || ||||| || ||| Sbjct 173 GTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCAAGCTGCTTGCCA 232 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || | || |||||||||||||| || || |||||||| || || || Sbjct 233 GCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTG 292 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | |||||||| ||||||||| | ||| | || || || ||||| || Sbjct 293 ACGTTGTCAATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTTCCTGTCAGCGTC 352 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 353 TTGACGAAGATTTGCAT 369 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| || | |||| || |||||||| || ||||||||||| Sbjct 369 TACCACCACGGAGGCGCAAGACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAATCAG 428 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| ||| |||||| ||||| ||||||||| |||||||||||||||| || || | Sbjct 429 AGAGAGTACGCCCATCCTCTAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGGG 488 Query 118630 GTAT 118633 | || Sbjct 489 GGAT 492 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 118599 CCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGT 118658 ||||| |||| | |||||||| || || || |||||||||||||| ||| ||| Sbjct 2 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 61 Query 118659 TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718 ||||| | || | |||||| | ||||||||| | || | || || || || ||| Sbjct 62 TTAACGTTATCAATGGTGTCAGATGACTCGACCTCCAGCGTGATTGTCTTTCCAGTAAGA 121 Query 118719 GTTTTTACAAAAATCTGCATG 118739 || || ||||||||||||||| Sbjct 122 GTCTTGACAAAAATCTGCATG 142 >seq11775 Length=34147 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||||||||| ||||| ||||| || ||||| | |||||| |||||| Sbjct 24235 ACCAAGTGGAGTGTAGACTCCTTTTGTATGTTATAGTCGCTGAGAGTGCGGCCGTCCTCG 24176 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||||| || || || |||| || ||||| || || ||||| |||| Sbjct 24175 AGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCAGGAGGGATGC 24130 >seq14965 Length=33111 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || ||||||| || ||||| || || |||||||| || || ||| | | ||||||| Sbjct 8574 ACTAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAAAGTCCTCCCATCCTCG 8633 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 |||||||| |||||| | ||||| || |||||||||||||| || Sbjct 8634 AGCTGTTTCCCAGCGAAAATGAGGCGTTGCTGATCGGGAGGGAT 8677 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607 || || || ||||| ||||| | |||||| || || | || || |||||| | Sbjct 7859 TCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAATTGCTTCCCAGCGAAA 7918 Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667 |||||||| ||||| ||||| || || |||||||||||| ||| || || || | Sbjct 7919 ATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATCTTCGCCTTGACATTG 7978 Query 118668 TCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727 || | ||||||| ||| ||||| | || | || || || |||| || || ||| Sbjct 7979 TCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTCACA 8038 Query 118728 AAAATCTGCAT 118738 ||||||||||| Sbjct 8039 AAAATCTGCAT 8049 >seq14872 Length=27679 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || || ||||| ||||||| || || |||||| || || Sbjct 25075 GTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGCTCAGCGTACGGCCATCCTCTAGTTG 25134 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 |||||| ||| | ||||||||||| ||||| ||||| |||| Sbjct 25135 TTTTCCGGCGAAAATGAGACGCTGTTGATCAGGAGGGATGC 25175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433360442915728