Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03]
88,884 sequences; 131,718,925 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq9834 98.7 9e-16
seq11775 93.3 4e-14
seq14965 89.7 4e-13
seq14872 84.2 2e-11
>seq9834
Length=29888
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || ||||||||||| | |||||| ||| || ||||| || |||
Sbjct 173 GTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCAAGCTGCTTGCCA 232
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || | || |||||||||||||| || || |||||||| || || ||
Sbjct 233 GCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTG 292
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | |||||||| ||||||||| | ||| | || || || ||||| ||
Sbjct 293 ACGTTGTCAATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTTCCTGTCAGCGTC 352
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 353 TTGACGAAGATTTGCAT 369
Score = 89.7 bits (98), Expect = 4e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | ||| || | |||| || |||||||| || |||||||||||
Sbjct 369 TACCACCACGGAGGCGCAAGACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAATCAG 428
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| ||| |||||| ||||| ||||||||| |||||||||||||||| || || |
Sbjct 429 AGAGAGTACGCCCATCCTCTAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGGG 488
Query 118630 GTAT 118633
| ||
Sbjct 489 GGAT 492
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 118599 CCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGT 118658
||||| |||| | |||||||| || || || |||||||||||||| ||| |||
Sbjct 2 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 61
Query 118659 TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718
||||| | || | |||||| | ||||||||| | || | || || || || |||
Sbjct 62 TTAACGTTATCAATGGTGTCAGATGACTCGACCTCCAGCGTGATTGTCTTTCCAGTAAGA 121
Query 118719 GTTTTTACAAAAATCTGCATG 118739
|| || |||||||||||||||
Sbjct 122 GTCTTGACAAAAATCTGCATG 142
>seq11775
Length=34147
Score = 93.3 bits (102), Expect = 4e-14
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| ||||||||| ||||| ||||| || ||||| | |||||| ||||||
Sbjct 24235 ACCAAGTGGAGTGTAGACTCCTTTTGTATGTTATAGTCGCTGAGAGTGCGGCCGTCCTCG 24176
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635
||||| || || || |||| || ||||| || || ||||| ||||
Sbjct 24175 AGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCAGGAGGGATGC 24130
>seq14965
Length=33111
Score = 89.7 bits (98), Expect = 4e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|| ||||||| || ||||| || || |||||||| || || ||| | | |||||||
Sbjct 8574 ACTAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAAAGTCCTCCCATCCTCG 8633
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633
|||||||| |||||| | ||||| || |||||||||||||| ||
Sbjct 8634 AGCTGTTTCCCAGCGAAAATGAGGCGTTGCTGATCGGGAGGGAT 8677
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 118548 TCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAG 118607
|| || || ||||| ||||| | |||||| || || | || || |||||| |
Sbjct 7859 TCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAATTGCTTCCCAGCGAAA 7918
Query 118608 ATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGT 118667
|||||||| ||||| ||||| || || |||||||||||| ||| || || || |
Sbjct 7919 ATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATCTTCGCCTTGACATTG 7978
Query 118668 TCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 118727
|| | ||||||| ||| ||||| | || | || || || |||| || || |||
Sbjct 7979 TCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTCACA 8038
Query 118728 AAAATCTGCAT 118738
|||||||||||
Sbjct 8039 AAAATCTGCAT 8049
>seq14872
Length=27679
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || || ||||| ||||||| || || |||||| || ||
Sbjct 25075 GTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGCTCAGCGTACGGCCATCCTCTAGTTG 25134
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635
|||||| ||| | ||||||||||| ||||| ||||| ||||
Sbjct 25135 TTTTCCGGCGAAAATGAGACGCTGTTGATCAGGAGGGATGC 25175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433360442915728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |