Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq5859 201 1e-46 >seq5859 Length=97331 Score = 201 bits (222), Expect = 1e-46 Identities = 379/551 (69%), Gaps = 11/551 (2%) Strand=Plus/Plus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 |||||||||| || | ||||||||| | ||||||||| || || || ||||| || Sbjct 74114 CACGCAAAATTTGTGTGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAG 74173 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 14323 || ||||| | ||||||||| || ||||||||||| || |||||||||||||| || ||| Sbjct 74174 CCAGGCATGAGTCCTCGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAAT 74233 Query 14324 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14383 || || |||||||||||||| ||||| | || || |||| |||| | || || | Sbjct 74234 ATGCCTTCAACTGCAGCAAATGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCA 74293 Query 14384 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTA 14443 |||||||| |||||| || | ||| | || | | || || |||||||| || | Sbjct 74294 ATCCATTTAAGAGCCCAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCG 74353 Query 14444 AATAAATG-TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACAT 14502 || | || ||| | | | || | | | ||||||||||||||| || ||| | Sbjct 74354 AAAAGGTGAGTCCGT-TGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGT 74412 Query 14503 TTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCA 14562 ||| || ||||||||||| || | ||||| ||||| || || | ||||||| Sbjct 74413 TTCCGAATGTATGTTTTCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGAC 74472 Query 14563 TTGTACCT-CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTG 14621 ||| || | ||| | |||||||||| | |||||||| || || ||||| || | Sbjct 74473 TTGAACTTCCTGCG-AAAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCG 74531 Query 14622 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCA-----TTGCTGAGTTTTTT 14676 | ||||| || | || | ||||| || | || ||| | ||||| ||||| Sbjct 74532 CGAAAAAAGCAAGAATATGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGA--TTTTT 74589 Query 14677 CCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGC 14736 ||| || | ||| | ||||| || | ||| || | |||||||| || | || Sbjct 74590 CCAGTCCATGAGATCATGTGAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGC 74649 Query 14737 TTTTTTATACA 14747 ||| || |||| Sbjct 74650 TTTCTTGTACA 74660 Score = 122 bits (134), Expect = 8e-23 Identities = 374/578 (65%), Gaps = 3/578 (1%) Strand=Plus/Minus Query 14183 TTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATA 14242 || ||||| | || | || ||||| ||||| || | |||||||| | ||| ||| Sbjct 76221 TTAAGATGACTGAACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATA 76162 Query 14243 AGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 || ||||||||||| || || || ||||| | || || || || ||||| || || | Sbjct 76161 AGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGAC 76102 Query 14303 GCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCA 14362 ||||||||||| || || || || || || || || || || || | || ||||| || Sbjct 76101 GCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCG 76042 Query 14363 AACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAA 14422 || | | | ||||| |||||||| ||||| |||| ||| || ||| | Sbjct 76041 AATGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAG 75982 Query 14423 TCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTA 14482 || || || || || | || | || ||| || | | | | ||||| || Sbjct 75981 GGAATGGTCTCGATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTG 75922 Query 14483 TCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAA 14542 || || |||| | || | || ||||| ||||||||||| || || ||||| || Sbjct 75921 TCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAG 75862 Query 14543 AAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTA 14602 ||||| | ||||| | ||| || || |||| || || | || |||||| Sbjct 75861 AAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTA 75802 Query 14603 ACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCA 14662 ||||| |||||| ||||| || || || | | | || || | | || | Sbjct 75801 ACTATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTG 75742 Query 14663 TTGCTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTC 14719 | | ||| | || | ||| || || |||||| |||||||| | || || | ||| Sbjct 75741 TCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTC 75682 Query 14720 CAAAAACTAGCAACAGCTTTTTTATACATTACCCATAT 14757 ||||| ||| | || |||||||||||| |||||| Sbjct 75681 CAAAACGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481809689921120