Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5859 172 5e-38 seq9834 98.7 9e-16 seq4769 89.7 5e-13 >seq5859 Length=97331 Score = 172 bits (190), Expect = 5e-38 Identities = 383/567 (68%), Gaps = 21/567 (4%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | ||||| ||||||||||| || ||||||||||||| |||||| | || || Sbjct 75644 ATATGGCAAATGTATAAAAAGGCAGAGGCTTCGTTTTGGACCGCCGAAGAGATGGATCTT 75703 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| || ||| | || |||| || || | |||| || Sbjct 75704 TCCAAGGATCTACATGACTGGCACAACCGTCTCAACGACAACGAACGTCATTTCATCTCT 75763 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || | ||||| ||||| || || ||||| || ||||| ||||| | | || || Sbjct 75764 CATGTTCTCGCGTTCTTCGCAGCGTCTGATGGGATAGTTAATGAGAACCTCCTTGAGAGG 75823 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 |||||| | ||||| ||||| |||| ||| | || || ||||| || ||| | || Sbjct 75824 TTTTCAAACGAAGTCCAAGTTGCGGAAGCGCGTTGTTTCTACGGTTTCCAAATTATGATG 75883 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 |||||| | || || || | || || ||||||||||| || ||| | || || | ||| Sbjct 75884 GAAAACATTCACTCCGAGACCTACTCCCTACTCATCGACACTTACATCAAAGATGCCACG 75943 Query 57865 --ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGAT--CGCCAAGAAG 57920 ||||||| || || ||| |||| ||||| || || ||| || || | ||| Sbjct 75944 GAACGAGAA---TA-TCTTTTCGACGCCATCGAGACCATTCCCTGTATAAAGCGA--AAG 75997 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCA---CGGCCACGTTCGCCGAGAGGCTA 57977 || || ||| | | ||||| | || || | || |||| || || | Sbjct 75998 GCTGACTGGGCCCTGCGGTGGAT---ATCCGACAAACATTCGACATTCGGTGAACGGTTG 76054 Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGG 58037 | || |||||||| |||||||| || || || || || || ||| | || || ||| Sbjct 76055 GTGGCCTTCGCCGCTGTCGAAGGCATCTTTTTCTCTGGATCATTCGCGTCCATCTTCTGG 76114 Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097 ||||||| || || || ||||| ||| |||| ||| |||||| | || ||||| Sbjct 76115 TTGAAGAAGCGTGGTCTCATGCCTGGCTTGACCTTTTCAAACGAGCTTATCAGTCGCGAT 76174 Query 58098 GAGGGTCTCCATACTGATTTTGCGTGC 58124 |||||| | || || ||||| |||||| Sbjct 76175 GAGGGTATGCACACAGATTTCGCGTGC 76201 Score = 168 bits (186), Expect = 6e-37 Identities = 388/571 (68%), Gaps = 25/571 (4%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | ||||||| || ||||| ||||| |||||||||| |||||| | ||||| Sbjct 74670 ATTTGGCAGCTGTACAAGAAAGCAGAGGCATCATTTTGGACCGCAGAAGAATTGGACCTT 74611 Query 57630 TCTAAGGATCTGAGCGATTGGGAT--TCC-CTCAAAGAATCTGA-GA--GAAATTTTATT 57683 || | ||||| | || ||| | || || || | |||| || | ||||||| Sbjct 74610 TCACATGATCTCATGGACTGGAAAAATCAGCTAAACG---CTGACGAACGTTATTTTATC 74554 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 || | | || |||||||| || |||||||| ||||| || || || | | ||| Sbjct 74553 TCTCATATTCTTGCTTTTTTCGCGGCGTCCGATGGCATTGTCAATGAAAACCTTATTGAA 74494 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 |||||||| || ||||| ||||| | || || | ||||| || ||||||||||| Sbjct 74493 AGATTTTCGCAGGAAGTTCAAGTCGCAGAAGCCCGTTGCTTCTATGGATTTCAAGTCATG 74434 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA---- 57859 || |||||| | ||||| |||| ||||| | || || ||||| ||||| || || Sbjct 74433 ATCGAAAACATACATTCGGAAACTTATTCTTTGCTTATTGATACATACGTCAAAGATCCT 74374 Query 57860 CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG-- 57917 || | ||| || | || ||| | || || ||||| || ||| | | |||| Sbjct 74373 CATCAACG-GA---CTCACCTTTTCGAGGCAATTGAAACCAT-CCCTTG--TGTCAAGCA 74321 Query 57918 -AAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCA-CGTTCGCCGAGAGGC 57975 || || || ||| | | |||||||| || || | || | || || ||| | | Sbjct 74320 CAAAGCCGACTGGGCTCTTAAATGGATTGCCGACG-AACAGTCATCTTTTGCGGAGCGCC 74262 Query 57976 TAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTT 58035 | || || || || || || ||||| ||||| || || || || || || ||||||| Sbjct 74261 TCATAGCATTTGCTGCAGTTGAAGGCATATTTTTCTCCGGATCATTCGCAGCTATATTTT 74202 Query 58036 GGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCG 58095 || |||||||||| || || ||||| ||| |||| || || ||| | || || | Sbjct 74201 GGTTGAAGAAACGAGGACTCATGCCTGGCTTGACATTCTCTAATGAGCTTATTAGTCGTG 74142 Query 58096 ACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 | ||||| | || || ||||||||||||| Sbjct 74141 ATGAGGGCATGCACACAAATTTTGCGTGCCT 74111 >seq9834 Length=29888 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| |||||||| || || |||||| | || || || | || Sbjct 369 ATGCAAATCTTCGTCAAGACGCTGACAGGAAAGACCATCACCCTTGAGGTCGAGTCTTCG 310 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || |||||||||||| | || ||||| ||| Sbjct 309 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 250 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||||||||| ||| | ||||| | ||| | ||||| ||| Sbjct 249 CAACGCTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACTCTCTCTGATTACAAC 190 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || |||||||| || | | ||| | ||||| Sbjct 189 ATCCAGAAGGAGTCTACCCTTCATCTCGTTTTGCGTCTGCGTGGCGG 143 >seq4769 Length=19565 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/176 (72%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 23353 CATA-AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| ||||| ||||||||||| || || || ||||| || | ||||| | ||||||| Sbjct 7026 CATACAAAAGGTCCGGTATCCAGAGTGCATAAAACAGATCTCTTGCGCGAGCTTCCTCTT 6967 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| |||||| ||| || | || || || | ||||| ||||| || |||| | Sbjct 6966 TTCCGTGGTTCTTCCTCAGGTCAATGAAATCGAAGATATCCGCGTGCCATGGTTCGATAT 6907 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527 ||| | || || || |||| || || || || |||||||| || || || ||| Sbjct 6906 AAATCGTGAAAGCACCAGGTCGTTTGTTACCCCCTTGATCGACATACCGAGCAGTG 6851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445271131241280