Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4769 84.2 4e-11 >seq4769 Length=19565 Score = 84.2 bits (92), Expect = 4e-11 Identities = 173/255 (68%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTA-AGAGTATCATAAATACC 94844 |||| |||||| || || || ||| ||||| || | || || ||||| ||||| || Sbjct 6699 CCGATTCCTCCTGCGGTTTTACTGATCATTGC-GCAACTTTTCAGGGTATCGTAAATTCC 6641 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 || || ||| || | | || | |||||||| || ||||| || | || Sbjct 6640 ATCGATCGAATCGTCCTTCATGCAGACGAGGAAGCAGGAACTGAGTTGAGGATTAGGGGT 6581 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || || ||||| ||||||||||| || || | ||||| || | || Sbjct 6580 ACCAGCATTGAAAAGAGTGGGCGAAGCATGGGTGAAGTATCGTTCAGACATAAGGTTGTA 6521 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || |||||||| | || ||| || || || || ||||| |||||||||||||| Sbjct 6520 AGTCTCAATGACCCGGTCGACGTCCCTGCCATGTATTCCTACAGCGACACGCATAATCAT 6461 Query 95025 GTCCTGAGGGCGCTC 95039 || ||| || ||||| Sbjct 6460 GTGCTGTGGACGCTC 6446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988457035764220