Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5859 194 2e-44 seq4769 84.2 3e-11 >seq5859 Length=97331 Score = 194 bits (214), Expect = 2e-44 Identities = 367/535 (69%), Gaps = 10/535 (2%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||| ||||| || | |||||| | || ||||| || || | || ||||| || || Sbjct 74128 GTGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCC 74187 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 || || || | ||||||||| | |||||||||||||| || || || ||||| ||||| Sbjct 74188 TCGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGC 74247 Query 33716 AGCAAAGGCAATAAGTCTCTCTCCATAA-CCGGCGCT--GTCATGTATCCACTTTTGAGC 33772 |||||| || || || | ||| || || | | | ||| ||||| || |||| Sbjct 74248 AGCAAATGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGC 74307 Query 33773 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33832 ||| ||||| || | || |||||||| || ||||| || || | || || | | Sbjct 74308 CCAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCG 74367 Query 33833 ttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATG 33890 || || | |||||| || || ||||| || | ||||| ||| |||||||||| ||| Sbjct 74368 TTGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGA--ATAAGTTTCCGAATGTATG 74425 Query 33891 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 33950 ||||| || | |||||||| ||||| || | || || | | || ||||| Sbjct 74426 TTTTCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGC 74485 Query 33951 CAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAAT 34010 |||||| ||| | |||||||| || || ||||| || || ||||| || | Sbjct 74486 GAAAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGA 74545 Query 34011 ACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCT 34067 | ||| |||||||| |||||| | ||| | || ||||| || ||| ||| Sbjct 74546 ATATGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCA 74605 Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 34122 | || | |||| |||||| | |||||||||||||||||||| || || |||| Sbjct 74606 TGTGAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 Score = 194 bits (214), Expect = 2e-44 Identities = 437/653 (67%), Gaps = 8/653 (1%) Strand=Plus/Minus Query 33487 CAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTT 33546 |||| | |||||||| || ||| ||||| | ||| || ||||| | || || || Sbjct 76295 CAGTCAAGAATTCTTGCTCGATGACAACCGCTTCTGTGATGATAAACTTCACAGTGTCGG 76236 Query 33547 CACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33606 | ||| | | | ||| | |||| ||| || |||||||| ||||| ||||| Sbjct 76235 GATGCGGACGGCGCTTAAGATGACTGAACAGCAAGCACGCGAAATCTGTGTGCATACCCT 76176 Query 33607 CGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAA 33666 | || | ||| || | ||||| ||||| || | || ||||| || |||||||| || | Sbjct 76175 CATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTTCA 76116 Query 33667 GCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 ||| || ||||| ||||||||||| || || ||||| ||||| || || || ||||| | Sbjct 76115 ACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCA 76056 Query 33727 TAAGTCTCTCTCC--ATAACCGGCGCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCT 33783 | | || || || | | | ||| ||||||| | ||||| || |||| Sbjct 76055 CCAACCGTTCACCGAATGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGCCT 75996 Query 33784 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 33843 | |||| ||| || || || || ||||| | || ||||| | | ||| | || Sbjct 75995 TTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAAAAGATATTCTCGTTCCGTGGCAT 75936 Query 33844 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 33903 |||| | ||||| ||||| | || || | || || ||||||||||| || | Sbjct 75935 CTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAA 75876 Query 33904 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTG 33963 | || || ||||||||||| | || || | || || ||||| | |||| | || Sbjct 75875 TTTGGAAACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAA 75816 Query 33964 CTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 34023 | || ||||| ||||| |||||| ||||| || ||||| | ||||| || | Sbjct 75815 GGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGA 75756 Query 34024 AATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGATATCTTTAGATATATCC 34079 ||| ||||| || ||| | || | ||| |||| | ||| || || | |||| Sbjct 75755 AATGACGTTCGT-TGTCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATCC 75697 Query 34080 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132 | ||||| | |||||||| || |||||||||||||||||||| | ||| || Sbjct 75696 ATCTCTTCGGCGGTCCAAAACGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 >seq4769 Length=19565 Score = 84.2 bits (92), Expect = 3e-11 Identities = 169/251 (67%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 63543 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATG 63602 || || ||||| ||||| ||||| ||| | |||||| | ||| | || || || || Sbjct 6702 AGCCCGATTCCTCCTGCGGTTTTACTGATCATTGCGCAACTTTTCAGGGTATCGTAAATT 6643 Query 63603 CCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTA 63662 || || || ||| || ||||| | || || ||| | | ||| || || Sbjct 6642 CCATCGATCGAATCGTCCTTCATGCAGACGAGGAAGCAGGAACTGAGTTGAGGATTAGGG 6583 Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 || || ||||| || | || || ||||| || || || || |||||| | || ||| Sbjct 6582 GTACCAGCATTGAAAAGAGTGGGCGAAGCATGGGTGAAGTATCGTTCAGACATAAGGTTG 6523 Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782 || |||||||| | ||| | |||| ||| |||||||| ||||||||||| | | Sbjct 6522 TAAGTCTCAATGACCCGGTCGACGTCCCTGCCATGTATTCCTACAGCGACACGCATAATC 6463 Query 63783 ATGTGCTGAGG 63793 |||||||| || Sbjct 6462 ATGTGCTGTGG 6452 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126 || ||| |||| | |||||||||||| ||||| |||| ||| ||||||| || ||| Sbjct 8395 GCAGGTCTCGTTCTTAGATAGTACATGCCCGTCTTTAAACCTTTCTTCCATCCATAGAAA 8336 Query 62127 TGCATACTCGTTAGTTTGGAATAA--CTCGGATCTGCTATATGGATATTCATAGATTGAC 62184 ||||||||||| || || ||| | | |||| | |||||| |||| |||| Sbjct 8335 TGCATACTCGTCAG-CTGTCCTAATGTTGGCGCCTGC-AGATGGATGTTCAGGCTCTGAC 8278 Query 62185 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTT 62244 | || ||||||||||| | |||||||| | | |||||| |||| || || | Sbjct 8277 TCTGGCAAATGAAGGCTCCGCGGTCTGCAGATAGGTCGATGATCTTCTTCTGACTGATCT 8218 Query 62245 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 62281 |||| | ||| ||||| | | ||| | ||| || || Sbjct 8217 CCCAGACAGTCTTATAGATTGCCTTGACATCGTCGGG 8181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629117841155520