Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5859 149 6e-31 >seq5859 Length=97331 Score = 149 bits (164), Expect = 6e-31 Identities = 363/548 (66%), Gaps = 8/548 (1%) Strand=Plus/Plus Query 11630 CACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAAT 11689 |||||||||| || | || || || | ||| || || |||||||| ||||| || Sbjct 74114 CACGCAAAATTTGTGTGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAG 74173 Query 11690 CCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAAT 11749 || ||||| | ||||||||| || | |||||||||||| || ||||| || || || ||| Sbjct 74174 CCAGGCATGAGTCCTCGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAAT 74233 Query 11750 ATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCC---ATATACCTTGTTGCTAGAT 11806 || || || || || |||||||||| | | || | | || || | | | Sbjct 74234 ATGCCTTCAACTGCAGCAAATGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCA 74293 Query 11807 ATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTA 11866 |||||||| ||||| || ||||| | || || || || ||||| || || | Sbjct 74294 ATCCATTTAAGAGCCCAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCG 74353 Query 11867 AATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATT 11926 || | || | || | |||| | || |||||||| || | ||| ||| || Sbjct 74354 AAAAGGTGAGTCCGTTGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTT 74413 Query 11927 TCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC 11986 || ||||| || ||||| || | ||||||||||||||| || || || |||| Sbjct 74414 TCCGAATGTATGTTTTCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACT 74473 Query 11987 TGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCA 12046 || || ||| |||||||||| | || ||||| ||||| ||||| | || Sbjct 74474 TGAACTTCCTGCGAAAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCG 74533 Query 12047 AAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTC----TTTAGTTAATTTATCCCA 12102 ||||| || || ||||| ||||| || |||||| ||||| | |||| | ||| Sbjct 74534 AAAAAAGCAAGAATATGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTT-TTCCA 74592 Query 12103 ATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTG 12162 || | ||| | ||| | || | |||||| |||||||||| |||| ||| || Sbjct 74593 GTCCATGAGATCATGTGAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTT 74652 Query 12163 TTTATACA 12170 || |||| Sbjct 74653 CTTGTACA 74660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468004245520960