Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5859 179 5e-40 seq4769 89.7 7e-13 >seq5859 Length=97331 Score = 179 bits (198), Expect = 5e-40 Identities = 381/566 (67%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| ||| || |||||||| ||| | |||||| || | ||| || | ||||| ||| Sbjct 76209 AACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAA 76150 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || | || ||||| || |||||||| || | ||| || |||||||| ||||||||| Sbjct 76149 AAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCA 76090 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC-- 36326 || || || || ||||| || || || ||||| | | | || || | | | Sbjct 76089 GAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGT 76030 Query 36327 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 36385 |||| ||||||| | ||||| || ||||| |||| ||| || || ||||| Sbjct 76029 TTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCG 75970 Query 36386 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 36445 || || | || ||||| | | ||| | |||||| | || || || || | || Sbjct 75969 ATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGG 75910 Query 36446 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 36505 || | || || ||||||||||| || ||||| || ||||||||||| | || Sbjct 75909 GAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACGCGCT 75850 Query 36506 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 36565 || | || || ||||| | |||| | || | || ||||| ||||| || ||| Sbjct 75849 TCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCA 75790 Query 36566 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTT--GGTGTTA-GT 36622 ||||| || ||||| | ||||| || |||| |||||| | || | | Sbjct 75789 GACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGG 75730 Query 36623 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 36682 || | ||| |||| | ||| || || | ||||| ||||| | |||||||| || ||| Sbjct 75729 TTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGCC 75670 Query 36683 TCTGCCTTTTTATACATATTCCAGAT 36708 ||||||||||||||||| | ||| || Sbjct 75669 TCTGCCTTTTTATACATTTGCCATAT 75644 Score = 176 bits (194), Expect = 6e-39 Identities = 359/529 (68%), Gaps = 12/529 (2%) Strand=Plus/Plus Query 36179 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 36238 ||||| || | |||||| | || || || || || | || ||||| || || || || Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 36239 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298 || | ||||||||| | || |||||||| || || || || ||||| ||||| ||||| Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 36299 GCAATAAGTCTCTCTCCATAACCGGCACTGT----CATGTATCCACTTTTGAGCCCAATC 36354 || || || | ||| || || | ||||| | ||||| || ||||||| || Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGATG-ACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTC 74313 Query 36355 GGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATT 36414 ||| || | || |||||||| || || || || || | || || | | || || Sbjct 74314 GGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGATG 74373 Query 36415 ACTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCGAATGAATGTTTTCA 36472 | |||||| || ||||||||||| | ||||| ||| |||||||||| |||||||| Sbjct 74374 AGGATCTTTGACGTATGTATCAATAAGCAAAGA--ATAAGTTTCCGAATGTATGTTTTCG 74431 Query 36473 ATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAAT 36532 || | ||||||||| ||||| || | || || | | || ||||| ||||| Sbjct 74432 ATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAAAT 74491 Query 36533 CGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGT 36592 | ||| | |||||||| || || || || || || ||||| || | | ||| Sbjct 74492 CTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATATGA 74551 Query 36593 TTTATAAAATATTTTTCGTTTGGTGTTA---GTTTATTCCAATCATTGATATCTTTAGAT 36649 |||||||| ||||| | ||| | || ||||| || ||| ||| | || Sbjct 74552 GAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGTGAA 74611 Query 36650 ATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 36698 | |||| |||||| | |||||||||||||||||||| || || |||| Sbjct 74612 AGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 >seq4769 Length=19565 Score = 89.7 bits (98), Expect = 7e-13 Identities = 173/254 (68%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395 || || ||||| ||||| ||||| ||| | |||||| | ||| | ||||| || || Sbjct 6702 AGCCCGATTCCTCCTGCGGTTTTACTGATCATTGCGCAACTTTTCAGGGTATCGTAAATT 6643 Query 66396 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 66455 || || || ||| ||| ||||| | || || ||| || | | ||| || || Sbjct 6642 CCATCGATCGAATCGTCCTTCATGCAGACGAGGAAGCAG---GAACTGAGTTGAGGATTA 6586 Query 66456 G---TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 66512 | | || ||||| || | || || ||||| || || || || |||||| | || Sbjct 6585 GGGGTACCAGCATTGAAAAGAGTGGGCGAAGCATGGGTGAAGTATCGTTCAGACATAAGG 6526 Query 66513 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 66572 ||||| |||||||| | ||| | |||| ||| |||||||| ||||||||||| Sbjct 6525 TTGTAAGTCTCAATGACCCGGTCGACGTCCCTGCCATGTATTCCTACAGCGACACGCATA 6466 Query 66573 AACATGTGCTGAGG 66586 | ||||||||| || Sbjct 6465 ATCATGTGCTGTGG 6452 Score = 89.7 bits (98), Expect = 7e-13 Identities = 192/283 (68%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919 || ||| |||| | |||||||||||| ||||| |||| ||| ||||||| || ||| Sbjct 8395 GCAGGTCTCGTTCTTAGATAGTACATGCCCGTCTTTAAACCTTTCTTCCATCCATAGAAA 8336 Query 64920 TGCATACTCGTTAGTTTGGAATAA--CTCGGATCTGCTATATGGATATTCATAGATTGAC 64977 ||||||||||| || || ||| | | |||| | |||||| |||| |||| Sbjct 8335 TGCATACTCGTCAG-CTGTCCTAATGTTGGCGCCTGC-AGATGGATGTTCAGGCTCTGAC 8278 Query 64978 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTT 65037 | || ||||||||||| | |||||||| | | |||||| |||| || || | Sbjct 8277 TCTGGCAAATGAAGGCTCCGCGGTCTGCAGATAGGTCGATGATCTTCTTCTGACTGATCT 8218 Query 65038 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 65094 |||| | ||| ||||| | | ||| | ||| || || | | | | | ||||| || | Sbjct 8217 CCCAGACAGTCTTATAGATTGCCTTGACATCGTCGGGGATGGTGGGGATGTTCTGGATCG 8158 Query 65095 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCA 65137 | || | || || ||| ||||||| || | |||| ||| Sbjct 8157 AGCCGTTGTGAGCAATGATCATATTCTTCATGTTGTCATCCCA 8115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657441537110560