Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5859 219 6e-52 seq4769 93.3 6e-14 >seq5859 Length=97331 Score = 219 bits (242), Expect = 6e-52 Identities = 443/654 (68%), Gaps = 10/654 (2%) Strand=Plus/Minus Query 49865 CAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTT 49924 |||| | |||||||| || ||| ||||| ||||| || ||| | | || || || Sbjct 76295 CAGTCAAGAATTCTTGCTCGATGACAACCGCTTCTGTGATGATAAACTTCACAGTGTCGG 76236 Query 49925 CACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 49984 | ||| | || | ||| | |||| ||| || |||||||| ||||| ||||| Sbjct 76235 GATGCGGACGGCGCTTAAGATGACTGAACAGCAAGCACGCGAAATCTGTGTGCATACCCT 76176 Query 49985 CGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAA 50044 | || | ||| || || ||||| ||||| || | || ||||| || |||||||| || | Sbjct 76175 CATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTTCA 76116 Query 50045 GCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAA 50104 ||| || |||||||| ||||| ||||| || ||||| ||||| || ||||| ||||| | Sbjct 76115 ACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCA 76056 Query 50105 CAAGTCTCTCTCCATAACTGGCGC-----TGTCATGTATCCACTTTTGAGCCCAATCGGC 50159 | | | || || | || || |||| ||||||| | ||||| || || Sbjct 76055 CCAACCGTTCACCGAA--TGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGC 75998 Query 50160 CTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACT 50219 ||| |||| ||| || || || || ||||| | || ||||| | | ||| | Sbjct 75997 CTTTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAAAAGATATTCTCGTTCCGTGGC 75938 Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||| | ||||| ||||| | || || | || || ||||||||||| || Sbjct 75937 ATCTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCAT 75878 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || ||||||||||| | || || | || || ||||| | |||| | || Sbjct 75877 AATTTGGAAACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTC 75818 Query 50340 AGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 50399 | | || ||||| ||||| || ||| ||||| || ||||| | ||||| || Sbjct 75817 AAGGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGAT 75758 Query 50400 AAAATGTTTTTCGTTG--GGTGTTA-GTTTATTCCAATCATTGATATCTTTAGATATATC 50456 ||||| ||||||| | || | | || | ||| |||| | ||| || || | ||| Sbjct 75757 GAAATGACGTTCGTTGTCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATC 75698 Query 50457 TACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 50510 | ||||| | |||||||| || |||||||||||||||||||| | ||| || Sbjct 75697 CATCTCTTCGGCGGTCCAAAACGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 Score = 163 bits (180), Expect = 4e-35 Identities = 360/535 (67%), Gaps = 10/535 (2%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||||| ||||| || | |||||| || || || || || || | || ||||| || || Sbjct 74128 GTGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCC 74187 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 || || || | ||||||||| | || ||||| || || || || || ||||| ||||| Sbjct 74188 TCGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGC 74247 Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGCGCT--GTCATGTATCCACTTTTGAGC 50150 ||||| || | || | ||| || || || | | ||| ||||| || |||| Sbjct 74248 AGCAAATGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGC 74307 Query 50151 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 50210 ||| ||||| || | || |||||||| || ||||| || || | || || | | Sbjct 74308 CCAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCG 74367 Query 50211 ttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATG 50268 || || | |||||| || || ||||| || | ||||| ||| |||||||||| ||| Sbjct 74368 TTGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGA--ATAAGTTTCCGAATGTATG 74425 Query 50269 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 50328 ||||| || | |||||||| ||||| || | || || | | || ||||| Sbjct 74426 TTTTCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGC 74485 Query 50329 CAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 50388 |||||| |||| | |||||||| || || || || || || ||||| || | Sbjct 74486 GAAAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGA 74545 Query 50389 ACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT---CCAATCATTGATATCT 50445 | ||| ||||||| ||||| | |||| | ||| ||| || ||| ||| Sbjct 74546 ATATGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCA 74605 Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500 | || | || | |||||| | |||||||||||||||||||| || || |||| Sbjct 74606 TGTGAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 >seq4769 Length=19565 Score = 93.3 bits (102), Expect = 6e-14 Identities = 193/283 (68%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || ||| |||| | |||||||||||| ||||| |||| ||| ||||||| |||||| Sbjct 8395 GCAGGTCTCGTTCTTAGATAGTACATGCCCGTCTTTAAACCTTTCTTCCATCCATAGAAA 8336 Query 78799 TGCATACTCGTTAGTTTGGAATAA--CTCGGATCTGCTATATGGATATTCATAGATTGAC 78856 ||||||||||| || || ||| | | |||| | |||||| |||| |||| Sbjct 8335 TGCATACTCGTCAG-CTGTCCTAATGTTGGCGCCTGC-AGATGGATGTTCAGGCTCTGAC 8278 Query 78857 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTT 78916 | || ||||||||||| | |||||||| | | |||||| |||| || || | Sbjct 8277 TCTGGCAAATGAAGGCTCCGCGGTCTGCAGATAGGTCGATGATCTTCTTCTGACTGATCT 8218 Query 78917 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 78973 |||| | ||| ||||| | | ||| | ||| || || | | | | | ||||| || | Sbjct 8217 CCCAGACAGTCTTATAGATTGCCTTGACATCGTCGGGGATGGTGGGGATGTTCTGGATCG 8158 Query 78974 ATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCA 79016 | || | || || ||| ||||||| || | |||| ||| Sbjct 8157 AGCCGTTGTGAGCAATGATCATATTCTTCATGTTGTCATCCCA 8115 Score = 86.0 bits (94), Expect = 9e-12 Identities = 172/254 (68%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 || || ||||| ||||| ||||| ||| | |||||| | ||| | ||||| || || Sbjct 6702 AGCCCGATTCCTCCTGCGGTTTTACTGATCATTGCGCAACTTTTCAGGGTATCGTAAATT 6643 Query 80275 CCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 80334 || || || ||| || ||||| | || || ||| || | | ||| || || Sbjct 6642 CCATCGATCGAATCGTCCTTCATGCAGACGAGGAAGCAG---GAACTGAGTTGAGGATTA 6586 Query 80335 G---TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 80391 | | || ||||| || | || || ||||| || || || || |||||||| || Sbjct 6585 GGGGTACCAGCATTGAAAAGAGTGGGCGAAGCATGGGTGAAGTATCGTTCAGACATAAGG 6526 Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATT 80451 ||||| |||||||| | || | |||| ||| |||||||| ||||||||||| Sbjct 6525 TTGTAAGTCTCAATGACCCGGTCGACGTCCCTGCCATGTATTCCTACAGCGACACGCATA 6466 Query 80452 AACATGTGCTGAGG 80465 | ||||||||| || Sbjct 6465 ATCATGTGCTGTGG 6452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717470767449760