Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5859 188 1e-42 seq4769 89.7 7e-13 >seq5859 Length=97331 Score = 188 bits (208), Expect = 1e-42 Identities = 368/537 (69%), Gaps = 14/537 (3%) Strand=Plus/Plus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 ||||| |||||||| | |||||| | || || || || || | || ||||| || || Sbjct 74128 GTGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCC 74187 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 || || || | ||||||||||| || |||||||| || || || || ||||| ||||| Sbjct 74188 TCGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGC 74247 Query 42199 CGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GTCATGTATCCACTTTTGAG 42254 ||||| || || || | ||| || || | ||| ||| ||||| || ||| Sbjct 74248 AGCAAATGCTATGAGGCGCTCCGCAAAAGATG-ACTGTTCGTCGGCAATCCATTTAAGAG 74306 Query 42255 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 42314 |||| ||||| || | || |||||||| || ||||| || || | || || | | Sbjct 74307 CCCAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCC 74366 Query 42315 tttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTATACATTTCTGAATGAAT 42372 || || | |||||| || |||||||| || | ||||| ||| |||| ||||| || Sbjct 74367 GTTGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGA--ATAAGTTTCCGAATGTAT 74424 Query 42373 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGT 42432 |||||| || | |||||||| ||||| || | ||| || | || || ||||| Sbjct 74425 GTTTTCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTG 74484 Query 42433 ACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 42492 |||||| |||| | ||||| || || || || || || || ||||| || | Sbjct 74485 CGAAAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAG 74544 Query 42493 TACATGTTTTATAAAATATTTTTCGTCCG-GT---GTTAATTTATTCCAATCATTGATAT 42548 | ||| |||||||| |||||| | || | | |||| ||||| || ||| || Sbjct 74545 AATATGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTT-TTCCAGTCCATGAGAT 74603 Query 42549 CTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACA 42605 | | || | || | ||||||| | |||||||||||||| ||||| || || |||| Sbjct 74604 CATGTGAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 Score = 179 bits (198), Expect = 5e-40 Identities = 381/566 (67%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| ||| || |||||||| ||||| ||||||||| | ||| || | ||||| ||| Sbjct 76209 AACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAA 76150 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || | || ||||| || |||||||| || | ||| || || ||||| ||||||||| Sbjct 76149 AAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCA 76090 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA--- 42232 || || ||||| ||||| || || || ||||| | | | || || | | | Sbjct 76089 GAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGT 76030 Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 |||| ||||||| | ||||| || ||||| |||| ||| || || || || Sbjct 76029 TTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCG 75970 Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGA 42352 ||||| | || ||||| | | ||| | |||||| | || || ||||| | || Sbjct 75969 ATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGG 75910 Query 42353 CTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCC 42412 || | || || ||||||||||| || || || || ||||||||||| | || Sbjct 75909 GAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACGCGCT 75850 Query 42413 TCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCA 42472 || | ||| || ||||| | |||| | ||| | || || || ||||| || ||| Sbjct 75849 TCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCA 75790 Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CCGGTGTTA-AT 42529 ||||| || ||||| | ||||| || |||| ||||| || || | Sbjct 75789 GACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGG 75730 Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589 || | ||| |||| | ||| || || | ||| | ||||| | |||||||| || || Sbjct 75729 TTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGCC 75670 Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615 ||||||||||||||||| | ||| || Sbjct 75669 TCTGCCTTTTTATACATTTGCCATAT 75644 >seq4769 Length=19565 Score = 89.7 bits (98), Expect = 7e-13 Identities = 173/254 (68%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 || || ||||| ||||| ||||| ||| | |||||| | ||| | ||||| || || Sbjct 6702 AGCCCGATTCCTCCTGCGGTTTTACTGATCATTGCGCAACTTTTCAGGGTATCGTAAATT 6643 Query 72358 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 72417 || || || ||| ||| ||||| | || || ||| || | | ||| || || Sbjct 6642 CCATCGATCGAATCGTCCTTCATGCAGACGAGGAAGCAG---GAACTGAGTTGAGGATTA 6586 Query 72418 G---TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474 | | || ||||| || | || || ||||| || || || || |||||||| || Sbjct 6585 GGGGTACCAGCATTGAAAAGAGTGGGCGAAGCATGGGTGAAGTATCGTTCAGACATAAGG 6526 Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534 ||||| |||||||| | || | |||| |||||||||||| ||||||||||| Sbjct 6525 TTGTAAGTCTCAATGACCCGGTCGACGTCCCTGCCATGTATTCCTACAGCGACACGCATA 6466 Query 72535 AACATATGCTGAGG 72548 | ||| ||||| || Sbjct 6465 ATCATGTGCTGTGG 6452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670393530791840