Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq9834 98.7 1e-15 >seq9834 Length=29888 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||||||||| | ||||| ||||| || || || ||||||||||| Sbjct 142 GCCGCCACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGA 201 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| ||||| || || || ||||| | |||| ||||||||||||||||| Sbjct 202 GAGAGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGG 261 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| || || || | | || | ||||||| | || || Sbjct 262 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGAC 321 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||| || | ||||| || |||| || || ||||| ||||||||| Sbjct 322 CTCAAGGGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCATA 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506451081650880