Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq5859 129 1e-24 seq68235 100 7e-16 seq9834 91.5 3e-13 seq14965 87.8 4e-12 >seq5859 Length=97331 Score = 129 bits (142), Expect = 1e-24 Identities = 372/563 (66%), Gaps = 12/563 (2%) Strand=Plus/Plus Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792 |||||| ||||| ||| |||| | ||||| |||||||| | ||||| | ||||| Sbjct 75644 ATATGGCAAATGTATAAAAAGGCAGAGGCTTCGTTTTGGACCGCCGAAGAGATGGATCTT 75703 Query 268793 TCTTATGACTTAATAGATTGGAAAAAT--TTAAAACCAGAAGAAAGAAGATTT-ATATCT 268849 || | || || || ||| | || | ||| | || || |||| || ||| Sbjct 75704 TCCAAGGATCTACATGACTGGCACAACCGTCTCAACGACAACGAACGTCATTTCATCTCT 75763 Query 268850 TATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAG 268909 || |||| ||||| || |||| |||||| || ||||| || || || | |||| | Sbjct 75764 CATGTTCTCGCGTTCTTCGCAGCGTCTGATGGGATAGTTAATGAGAACCTCCTTGAGAGG 75823 Query 268910 TTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATA 268969 || | | || || || || | ||||| | ||||| ||||| ||||| || || Sbjct 75824 TTTTCAAACGAAGTCCAAGTTGCGGAAGCGCGTTGTTTCTACGGTTTCCAAATTATGATG 75883 Query 268970 GAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAAC 269029 ||||| ||||| || |||| ||| ||| | || || ||||| || | ||| || | Sbjct 75884 GAAAACATTCACTCCGAGACCTACTCCCTACTCATCGACACTTACATCAAAGATGCCA-C 75942 Query 269030 GAAAAGAAAAGACTATTTTCTTCT--AT-GAGAACTATGGACTGTGTGAGaaaaaaaTCT 269086 | || || || | | ||||| | || |||| | || |||| | | ||| || Sbjct 75943 GGAACGAGAATA-TCTTTTCGACGCCATCGAGACC-ATTCCCTGTATAAAGCGAAAGGCT 76000 Query 269087 GAATGGGCTCTGAAATGGATAAACGATAGCG---CGCCTTACGGAGAAAGGTTAGTTGCT 269143 || ||||| ||| |||||| ||| | || | | ||| ||| |||| || || Sbjct 76001 GACTGGGCCCTGCGGTGGATATCCGACAAACATTCGACATTCGGTGAACGGTTGGTGGCC 76060 Query 269144 TTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAG 269203 || |||||||| ||||| || || || || || || || || | ||||| ||||||||| Sbjct 76061 TTCGCCGCTGTCGAAGGCATCTTTTTCTCTGGATCATTCGCGTCCATCTTCTGGTTGAAG 76120 Query 269204 AAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGT 269263 || | || || ||||| || || || || || ||||| | || || | || || ||| Sbjct 76121 AAGCGTGGTCTCATGCCTGGCTTGACCTTTTCAAACGAGCTTATCAGTCGCGATGAGGGT 76180 Query 269264 TTACACTGCGACTTCGCTTGTTT 269286 | ||| || ||||| || || Sbjct 76181 ATGCACACAGATTTCGCGTGCTT 76203 Score = 98.7 bits (108), Expect = 2e-15 Identities = 331/508 (65%), Gaps = 12/508 (2%) Strand=Plus/Minus Query 268743 TGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACT 268802 ||||||| | || | || || |||||||| | ||||||| | || || || |||| Sbjct 74660 TGTACAAGAAAGCAGAGGCATCATTTTGGACCGCAGAAGAATTGGACCTTTCACATGATC 74601 Query 268803 TAATAGATTGGAAAAATT---TAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTG 268859 | || || ||||||||| |||| | || ||| | ||||| ||| ||||||||| Sbjct 74600 TCATGGACTGGAAAAATCAGCTAAACGCTGACGAACGTTATTTTATCTCTCATATTCTTG 74541 Query 268860 CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAG 268919 | ||||| || | ||||| || || || ||||| || | || | || | || | Sbjct 74540 CTTTTTTCGCGGCGTCCGATGGCATTGTCAATGAAAACCTTATTGAAAGATTTTCGCAGG 74481 Query 268920 AGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTC 268979 | || || | | |||||| | || || || ||||| || | || ||||| || | Sbjct 74480 AAGTTCAAGTCGCAGAAGCCCGTTGCTTCTATGGATTTCAAGTCATGATCGAAAACATAC 74421 Query 268980 ATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAA-CAACGAAAAGAAA 269038 |||| || | || | | | || ||||| || | | ||| || | || | | Sbjct 74420 ATTCGGAAACTTATTCTTTGCTTATTGATACATACGTCAAAGATCCTCATC--AACGGAC 74363 Query 269039 AGACTATTTTCTT--CTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTC 269096 || ||||| | || ||| || ||||| | | ||| | || ||||||| Sbjct 74362 TCACC-TTTTCGAGGCAATTGAAACCATCCCTTGTGTCAAGCACAAAGCCGACTGGGCTC 74304 Query 269097 TGAAATGGATAAACGAT--AGCG-CGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTG 269153 | |||||||| ||| | | | ||| | || | | | || ||||| || | Sbjct 74303 TTAAATGGATTGCCGACGAACAGTCATCTTTTGCGGAGCGCCTCATAGCATTTGCTGCAG 74244 Query 269154 TAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCC 269213 | ||||| ||||| || || || || || || ||||| ||||||||||||||| |||| | Sbjct 74243 TTGAAGGCATATTTTTCTCCGGATCATTCGCAGCTATATTTTGGTTGAAGAAACGAGGAC 74184 Query 269214 TTATGCCAGGATTAACTTTCTCTAACGA 269241 | ||||| || || || |||||||| || Sbjct 74183 TCATGCCTGGCTTGACATTCTCTAATGA 74156 >seq68235 Length=344 Score = 100 bits (110), Expect = 7e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 |||||||| || | | ||| || ||||| || || || || || |||||||||||||| Sbjct 343 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 284 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || ||||| || | |||||| | || ||||| || || || ||||| |||||||| Sbjct 283 TTCACATTGTCAATGGTATCCGACGACTCCACCTCCAGCGTGATCGTCTTTCCAGTAAGA 224 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| |||||||| Sbjct 223 GTCTTGACAAAGATCTGCAT 204 Score = 96.9 bits (106), Expect = 8e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | || || || |||||||| |||||||| || ||||| | |||||| || ||| Sbjct 123 AGATGAAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCTCGAGT 64 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || |||||||| || | | ||| || ||||| || || || || || ||||||||| Sbjct 63 TGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATC 4 Query 104474 TTT 104476 ||| Sbjct 3 TTT 1 >seq9834 Length=29888 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 |||||||| || | | ||| || ||||| || || || || || |||||||||||||| Sbjct 2 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 61 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || || || || | ||| || | || ||||| || || || ||||| |||||||| Sbjct 62 TTAACGTTATCAATGGTGTCAGATGACTCGACCTCCAGCGTGATTGTCTTTCCAGTAAGA 121 Query 104540 GTTTTTACAAATATCTGCAT 104559 || || ||||| |||||||| Sbjct 122 GTCTTGACAAAAATCTGCAT 141 >seq14965 Length=33111 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/105 (80%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTC 104514 ||||| |||||||| ||||| || |||||||| || | |||||| | ||| ||| ||||| Sbjct 8451 CCTTCCTTATCCTGGATCTTCGCCTTTACATTGTCGATGGTATC-CGAGGATTCCACCTC 8509 Query 104515 TAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||||||||| || || || || || || || ||||| Sbjct 8510 CAGTGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 8554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150087157277872