Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq5859 111 2e-19 >seq5859 Length=97331 Score = 111 bits (122), Expect = 2e-19 Identities = 327/509 (64%), Gaps = 3/509 (1%) Strand=Plus/Plus Query 21491 TGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCT 21550 |||| || ||||| | ||| || | |||||||| ||||| || || ||||| | |||| Sbjct 74129 TGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCT 74188 Query 21551 CTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCA 21610 | || || ||||||||||| | || |||| ||| || || || ||||| ||||| ||| Sbjct 74189 CGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCA 74248 Query 21611 GCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCC 21670 |||||||| | | || || | | | || | || || |||||||| ||| Sbjct 74249 GCAAATGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGCC 74308 Query 21671 CATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGATGAtttttt 21730 || | || || | || | |||| || || ||||| || | ||||| ||| | | Sbjct 74309 CAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGT 74368 Query 21731 tCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTT 21790 | || ||| | | | | ||| |||| |||||||| ||| Sbjct 74369 TGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTT 74428 Query 21791 TCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACCTCGGAATAA 21850 || ||| | |||||||| || || || | || |||| |||||| || || Sbjct 74429 TCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAA 74488 Query 21851 AATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATA 21910 |||| || | | ||||||||| || || ||||| || || ||||| || | ||| Sbjct 74489 AATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATA 74548 Query 21911 TTTTTTATAAAATATCGTTCGTTATCTGTTA---ATTTTTTCCAATCTAATAAATCTTTT 21967 | |||||||| ||||||| | | ||| |||||||| || | | ||| | | Sbjct 74549 TGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGT 74608 Query 21968 GATAAATCTACTTCTTCAGTTGTCCAAAA 21996 || | || | |||||| | |||||||| Sbjct 74609 GAAAGGTCCAATTCTTCTGCGGTCCAAAA 74637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531309831616160