Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5859 197 2e-45 seq4769 89.7 6e-13 >seq5859 Length=97331 Score = 197 bits (218), Expect = 2e-45 Identities = 438/653 (67%), Gaps = 8/653 (1%) Strand=Plus/Minus Query 33209 CAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTT 33268 |||| | |||||||| || ||| ||||| ||||| || ||| | | || || || Sbjct 76295 CAGTCAAGAATTCTTGCTCGATGACAACCGCTTCTGTGATGATAAACTTCACAGTGTCGG 76236 Query 33269 CACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33328 | ||| | || | ||| | |||| ||| || |||||||| ||||| ||||| Sbjct 76235 GATGCGGACGGCGCTTAAGATGACTGAACAGCAAGCACGCGAAATCTGTGTGCATACCCT 76176 Query 33329 CGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAA 33388 | || | ||| || || ||||| ||||| || | || ||||| || |||||||| || | Sbjct 76175 CATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTTCA 76116 Query 33389 GCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 ||| || ||||| |||||||||||||| || ||||| ||||| || || || ||||| | Sbjct 76115 ACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCA 76056 Query 33449 TAAGTCTCTCTCC--ATAACCGGCG-CTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 33505 | | || || || | | |||| ||||||| | ||||| || |||| Sbjct 76055 CCAACCGTTCACCGAATGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGCCT 75996 Query 33506 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 33565 | |||| ||| || || || || ||||| | || ||||| | | ||| | || Sbjct 75995 TTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAAAAGATATTCTCGTTCCGTGGCAT 75936 Query 33566 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 33625 |||| | ||||| ||||| | || || | || || ||||||||||| || | Sbjct 75935 CTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAA 75876 Query 33626 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCG 33685 | || || ||||||||||| | || || | || || ||||| | |||| | || Sbjct 75875 TTTGGAAACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAA 75816 Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 | || ||||| ||||| || ||| ||||| || ||||| | ||||| || | Sbjct 75815 GGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGA 75756 Query 33746 AATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGATATCTTTAGATATATCT 33801 ||| ||||| || ||| | || | ||| |||| | ||| || || | ||| Sbjct 75755 AATGACGTTCGT-TGTCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATCC 75697 Query 33802 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGAT 33854 | ||||| | |||||||| || |||||||||||||||||||| | ||| || Sbjct 75696 ATCTCTTCGGCGGTCCAAAACGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 Score = 181 bits (200), Expect = 1e-40 Identities = 364/535 (68%), Gaps = 10/535 (2%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||| ||||| || | |||||| || || || || || || | || ||||| || || Sbjct 74128 GTGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCC 74187 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 || || || | ||||||||| | ||||||||||| || || || || ||||| ||||| Sbjct 74188 TCGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGC 74247 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATAA-CCGGCGCT--GTCATGTATCCACTTTTGAGC 33494 |||||| || || || | ||| || || | | | ||| ||||| || |||| Sbjct 74248 AGCAAATGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGC 74307 Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554 ||| ||||| || | || |||||||| || ||||| || || | || || | | Sbjct 74308 CCAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCG 74367 Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATG 33612 || || | |||||| || || ||||| || | ||||| ||| |||||||||| ||| Sbjct 74368 TTGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGA--ATAAGTTTCCGAATGTATG 74425 Query 33613 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTA 33672 ||||| || | |||||||| ||||| || | || || | | || ||||| Sbjct 74426 TTTTCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGC 74485 Query 33673 CAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 33732 |||||| ||| | |||||||| || || || || || || ||||| || | Sbjct 74486 GAAAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGA 74545 Query 33733 ACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCT 33789 | ||| |||||||| |||||| | ||| | || ||||| || ||| ||| Sbjct 74546 ATATGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCA 74605 Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844 | || | || | |||||| | |||||||||||||||||||| || || |||| Sbjct 74606 TGTGAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 >seq4769 Length=19565 Score = 89.7 bits (98), Expect = 6e-13 Identities = 192/283 (68%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || ||| |||| | |||||||||||| ||||| |||| ||| ||||||| || ||| Sbjct 8395 GCAGGTCTCGTTCTTAGATAGTACATGCCCGTCTTTAAACCTTTCTTCCATCCATAGAAA 8336 Query 62076 TGCATACTCGTTAGTTTGGAATAA--CTCGGATCTGCTATATGGATATTCATAGATTGAC 62133 ||||||||||| || || ||| | | |||| | |||||| |||| |||| Sbjct 8335 TGCATACTCGTCAG-CTGTCCTAATGTTGGCGCCTGC-AGATGGATGTTCAGGCTCTGAC 8278 Query 62134 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTT 62193 | || ||||||||||| | |||||||| | | |||||| |||| || || | Sbjct 8277 TCTGGCAAATGAAGGCTCCGCGGTCTGCAGATAGGTCGATGATCTTCTTCTGACTGATCT 8218 Query 62194 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 62250 |||| | ||| ||||| | | ||| | ||| || || | | | | | ||||| || | Sbjct 8217 CCCAGACAGTCTTATAGATTGCCTTGACATCGTCGGGGATGGTGGGGATGTTCTGGATCG 8158 Query 62251 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCA 62293 | || | || || ||| ||||||| || | |||| ||| Sbjct 8157 AGCCGTTGTGAGCAATGATCATATTCTTCATGTTGTCATCCCA 8115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622255074513440