Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq9834 109 5e-19 seq14965 95.1 1e-14 seq11775 89.7 5e-13 >seq9834 Length=29888 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||||| || | ||| | ||| |||||||| || ||||||||||| Sbjct 142 GCCGCCACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGA 201 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || || ||||||||||| ||| | || || || ||||| || ||||| Sbjct 202 GAGAGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGG 261 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| || ||||| | || | || || | ||||||| Sbjct 262 AATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGAC 321 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || ||||| || ||||| Sbjct 322 CTCAAGGGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 >seq14965 Length=33111 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | |||||||||||| ||||| || || ||| | Sbjct 8279 CCACCACGCAGACGGAGAACCAGATGAAGGGTCGACTCCTTCTGAATATTATAGTCGGAC 8338 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||||| |||||||| ||| |||||| ||| || ||||| |||||| Sbjct 8339 AGCGTACGACCATCCTCTAGTTGCTTGCCAGCGAAGATTAGACGTTGTTGGTCGGGAGGG 8398 Query 131128 AT 131129 || Sbjct 8399 AT 8400 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | || || ||||| || || ||||| || Sbjct 8051 CCACCACGGAGTCGAAGGACAAGATGCAGTGTTGATTCCTTCTGGATATTGTAGTCTGAA 8110 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||||| |||||| | ||||| || || |||| ||||||||||| ||||||||| Sbjct 8111 AGGGTGCGCCCGTCCTCCAATTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGGG 8170 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || ||| ||| |||| | | | || | || || | || || | Sbjct 8171 ATACCTTCCTTATCCTGGATCTTC-GCTTTAACGTTGTCGATGGTGTCTGATGATTCCAC 8229 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || | || || ||||| |||||||| Sbjct 8230 TTCGAGGGTGATAGTCTTCCCTGTCAATGTCTTCACGAAGATCTGCAT 8277 >seq11775 Length=34147 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || ||||||||||| ||||| || ||||| Sbjct 24253 CCACCACGGAGACGGAGAACCAAGTGGAGTGTAGACTCCTTTTGTATGTTATAGTCGCTG 24194 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| || |||| | ||||| ||||| |||||| Sbjct 24193 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCAGGAGGG 24134 Query 131128 AT 131129 || Sbjct 24133 AT 24132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471488370178560