Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5859 181 1e-40 seq4769 89.7 7e-13 >seq5859 Length=97331 Score = 181 bits (200), Expect = 1e-40 Identities = 360/528 (68%), Gaps = 10/528 (2%) Strand=Plus/Plus Query 32682 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 32741 ||||| || | |||||| | || || || || || | || ||||| || || || || Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 32742 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 32801 || | ||||||||| | || |||||||| || || || || ||||| ||||| ||||| Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 32802 GCAATAAGTCTCTCTCCATAACCGGC--GCT-GTCATGTATCCACTTTTGAGCCCAATCG 32858 || || || | ||| || || | | | ||| ||||| || ||||||| ||| Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTCG 74314 Query 32859 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 32918 || || | || |||||||| || || || || || | || || | | || || | Sbjct 74315 GCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGATGA 74374 Query 32919 CTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAA 32976 |||||| || ||||||||||| | ||||| ||| |||||||||| |||||||| | Sbjct 74375 GGATCTTTGACGTATGTATCAATAAGCAAAGA--ATAAGTTTCCGAATGTATGTTTTCGA 74432 Query 32977 TGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATC 33036 | | ||||||||| |||||||| | || || | | || ||||| |||||| Sbjct 74433 TCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAAATC 74492 Query 33037 GTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTT 33096 ||| | |||||||| || || || || || || ||||| || | | ||| Sbjct 74493 TTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATATGAG 74552 Query 33097 TTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCTTTAGATA 33153 |||||||| |||||| | ||| | || ||||| || ||| ||| | || | Sbjct 74553 AGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGTGAAA 74612 Query 33154 TATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33201 |||| |||||| | |||||||||||||||||||| || || |||| Sbjct 74613 GGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 Score = 174 bits (192), Expect = 2e-38 Identities = 381/567 (67%), Gaps = 8/567 (1%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| ||| || |||||||| ||| | |||||| || | ||| || | ||||| ||| Sbjct 76209 AACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAA 76150 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || | || ||||| || |||||||| || | ||| || |||||||| ||||||||| Sbjct 76149 AAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCA 76090 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCG- 32828 || || || || ||||| || || || ||||| | | | || || || | | Sbjct 76089 GAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGT 76030 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 |||| ||||||| | ||||| || ||||| |||| ||| || || ||||| Sbjct 76029 TTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCG 75970 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || | || ||||| | | ||| | |||||| | || || || || | || Sbjct 75969 ATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGG 75910 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || | || || ||||||||||| || ||||| || |||||||| || | || Sbjct 75909 GAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACGCGCT 75850 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068 || | || || ||||| | |||| | || | || ||||| ||||| || ||| Sbjct 75849 TCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCA 75790 Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AG 33124 ||||| || ||||| | ||||| || |||| ||||| || ||| | Sbjct 75789 GACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGT-TGTCGTTGAGACG 75731 Query 33125 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 33184 || | ||| |||| | ||| || || | ||||| ||||| | |||||||| || || Sbjct 75730 GTTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGC 75671 Query 33185 CTCTGCCTTTTTATACATATTCCAGAT 33211 |||||||||||||||||| | ||| || Sbjct 75670 CTCTGCCTTTTTATACATTTGCCATAT 75644 >seq4769 Length=19565 Score = 89.7 bits (98), Expect = 7e-13 Identities = 173/254 (68%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 63347 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 63406 || || ||||| ||||| ||||| ||| | |||||| | ||| | ||||| || || Sbjct 6702 AGCCCGATTCCTCCTGCGGTTTTACTGATCATTGCGCAACTTTTCAGGGTATCGTAAATT 6643 Query 63407 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 63466 || || || ||| ||| ||||| | || || ||| || | | ||| || || Sbjct 6642 CCATCGATCGAATCGTCCTTCATGCAGACGAGGAAGCAG---GAACTGAGTTGAGGATTA 6586 Query 63467 G---TTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGA 63523 | | || ||||| || | || || ||||| || || || || |||||| | || Sbjct 6585 GGGGTACCAGCATTGAAAAGAGTGGGCGAAGCATGGGTGAAGTATCGTTCAGACATAAGG 6526 Query 63524 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63583 ||||| |||||||| | ||| | |||| ||| |||||||| ||||||||||| Sbjct 6525 TTGTAAGTCTCAATGACCCGGTCGACGTCCCTGCCATGTATTCCTACAGCGACACGCATA 6466 Query 63584 AACATGTGCTGAGG 63597 | ||||||||| || Sbjct 6465 ATCATGTGCTGTGG 6452 Score = 84.2 bits (92), Expect = 3e-11 Identities = 191/283 (67%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||| |||| | |||||||||||| ||||| |||| ||| ||||||| || ||| Sbjct 8395 GCAGGTCTCGTTCTTAGATAGTACATGCCCGTCTTTAAACCTTTCTTCCATCCATAGAAA 8336 Query 61931 TGCATACTCGTTAGTTTGGAATAA--CTCGGATCTGCTATATGGATATTCATAGATTGAC 61988 ||||||||||| || || ||| | | |||| | |||||| |||| |||| Sbjct 8335 TGCATACTCGTCAG-CTGTCCTAATGTTGGCGCCTGC-AGATGGATGTTCAGGCTCTGAC 8278 Query 61989 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTT 62048 | || ||||||||||| | |||||||| | | || ||| |||| || || | Sbjct 8277 TCTGGCAAATGAAGGCTCCGCGGTCTGCAGATAGGTCGATGATCTTCTTCTGACTGATCT 8218 Query 62049 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 62105 |||| | ||| ||||| | | ||| | ||| || || | | | | | ||||| || | Sbjct 8217 CCCAGACAGTCTTATAGATTGCCTTGACATCGTCGGGGATGGTGGGGATGTTCTGGATCG 8158 Query 62106 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCA 62148 | || | || || ||| ||||||| || | |||| ||| Sbjct 8157 AGCCGTTGTGAGCAATGATCATATTCTTCATGTTGTCATCCCA 8115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632928003166400