Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5859 228 9e-55 >seq5859 Length=97331 Score = 228 bits (252), Expect = 9e-55 Identities = 382/549 (70%), Gaps = 5/549 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||||||||| | || || | || || || || || | |||||| |||||| || Sbjct 74113 GCACGCAAAATTTGTGTGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAA 74172 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | |||||||||||||| | ||||||||| | || || || || ||||| Sbjct 74173 GCCAGGCATGAGTCCTCGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAA 74232 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-CGGAATTACTGC 93269 ||| ||||| || || |||||||| | | || || |||||| || | | | || Sbjct 74233 TATGCCTTCAACTGCAGCAAATGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGC 74292 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 |||||||| | |||||| |||||||| | ||| | |||||| | ||||| || || | Sbjct 74293 A-ATCCATTTAAGAGCCCAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCT 74351 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 || |||| | || | | | |||| | ||||||||| || | || |||||| Sbjct 74352 CGAAAAGGTGAGTCCGTTGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAG 74411 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 |||| ||||| | || || || | ||| ||||| ||||| || | ||||| | || Sbjct 74412 TTTCCGAATGTATGTTTTCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGA 74471 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 || ||||| || |||||||| || | || ||||||||||| || |||||||| || | Sbjct 74472 CTTGAACTTCCTGCGAAAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCG 74531 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCC 93566 | |||||||| | ||||| ||||||| || ||| | || ||| || | || Sbjct 74532 CGAAAAAAGCAAGAATATGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCC 74591 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | || ||||| | |||||| || | |||||| | |||||||| ||||| ||||||| Sbjct 74592 AGTCCATGAGATCATGTGAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTT 74651 Query 93627 TTTTGTACA 93635 | ||||||| Sbjct 74652 TCTTGTACA 74660 Score = 185 bits (204), Expect = 1e-41 Identities = 387/573 (68%), Gaps = 13/573 (2%) Strand=Plus/Minus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCG--TGATATCAACTCATT 93138 || ||| |||||||| || || || || | ||| || || || ||||| | ||| || Sbjct 76211 TGAACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATA--AGCTCGTT 76154 Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198 || || || || || | || || || ||||| | ||| || || || || || Sbjct 76153 TGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGA 76094 Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258 ||||| ||||| || ||||| || || || || ||||| | ||||| | || || Sbjct 76093 TCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAA---TGT 76037 Query 93259 GGAATTACTGCTG---ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAG 93315 |||| || | ||||| | ||||| || || ||| ||| ||||| || | Sbjct 76036 CGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAAT 75977 Query 93316 TGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375 || ||||| |||| || || || ||||| || | |||| ||||| || ||||| Sbjct 75976 GGTCTCGATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGAT 75917 Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435 | || || || | || || || | || ||||| ||||||||| ||||||||||| Sbjct 75916 GAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACA 75857 Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495 | ||||||| | || ||||| | ||||| ||||| | ||| || ||||| ||||| Sbjct 75856 ACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTAT 75797 Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT 93555 ||||| || ||||| || || || | | ||| || ||||| || | || || Sbjct 75796 CCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTT 75737 Query 93556 ---AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | | || | ||| || |||||| || |||||||| | |||||| | |||||||| Sbjct 75736 GAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAA 75677 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||| || ||||| ||||| ||||| | |||||| Sbjct 75676 CGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556242099808160