Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9834 113 4e-20 seq14965 109 5e-19 >seq9834 Length=29888 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || |||| ||||| || || | | Sbjct 369 ATGCAAATCTTCGTCAAGACGCTGACAGGAAAGACCATCACCCTTGAGGTCGAGTCTTCG 310 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || |||||||| || ||||| |||||||| Sbjct 309 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 250 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | || ||| ||||| |||| ||||||||| Sbjct 249 CAACGCTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACTCTCTCTGATTACAAC 190 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || ||| | ||| | |||||||| |||| || || Sbjct 189 ATCCAGAAGGAGTCTACCCTTCATCTCGTTTTGCGTCTGCGTGGCGG 143 >seq14965 Length=33111 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || || || || || || |||| | || || || | | Sbjct 8049 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTAGAGTCTTCG 7990 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || ||||||||||||||||||||||||||||| || Sbjct 7989 GACACGATTGACAATGTCAAGGCGAAGATTCAAGACAAGGAGGGTATTCCACCCGACCAG 7930 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || || || || || || || || |||||| | || ||||| ||| Sbjct 7929 CAACGTCTCATTTTCGCTGGGAAGCAATTGGAAGACGGGCGCACCCTTTCTGATTATAAC 7870 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || ||| |||| Sbjct 7869 ATCCAGAAGGAAAGCACC 7852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419273319675460