Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5859 91.5 3e-13 >seq5859 Length=97331 Score = 91.5 bits (100), Expect = 3e-13 Identities = 126/175 (72%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 251541 TTGA-TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCT 251599 |||| || || || ||||| || ||||| || | ||| |||| || ||||| | | Sbjct 76541 TTGAGTAATCTGACACACGCTTCTCAAAGAAGTTGGTCTTCCCCTGAAGCGAGATCATGT 76482 Query 251600 CCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGA 251659 |||||||||| || ||||| || ||| ||| |||| | |||||||| || | || Sbjct 76481 CCATGAAGTCAAAAGGGTTCGTCACATCATACACCTTGTCGTTACCAAGTGCGACAAGGA 76422 Query 251660 TGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || || |||||||| | |||||| | ||| |||| |||||||| ||||| Sbjct 76421 GACGATCGGCAACAAACTCGATATACTGGCACATGAGTTTTGAGTTCATCCCAAT 76367 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 251545 TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATG 251604 ||||| ||||| | ||||||||||| | ||| || | || ||||| | ||||| Sbjct 73778 TATTCGGATACCCTCTTCTCGAAGAAATTGGTCTTCCCTTGAAGTGAGATCATATCCATA 73837 Query 251605 AAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGG 251664 || ||||| || ||||| ||||| || | ||| || ||||| | ||| | | ||| Sbjct 73838 AAATCGAATGGATTTGTTGCATTATAGTACTTTTCATTTCCAAGGGATACAAGTAGGCGA 73897 Query 251665 TCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || ||||||||||| | ||| || | ||||| | | | |||||||| || Sbjct 73898 TCGGCCACAAACTCAATATATTGACACATCAATACTGCATTCATGCCGAT 73947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026666272471444