Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq9834 100 3e-16 seq3995 95.1 1e-14 >seq9834 Length=29888 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| || | ||| | || |||||| || || |||||||||| ||||| || | Sbjct 154 ACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACC 213 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | || ||||| |||| || | | ||||| Sbjct 214 ATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCCTTCCTT 273 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || |||| ||| | || | |||| || || || || | |||| Sbjct 274 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCCGAAGACTCGACCTCAAGGGTGA 332 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || |||||||| || ||||||||||| Sbjct 333 TGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| || | ||| | || ||| || || || |||||||||| ||||| ||| | Sbjct 383 CGCAAGACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGAGTACGCCCA 442 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094 || ||||||||||| |||||||| ||||| ||||||||||| Sbjct 443 TCCTCTAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTC 483 >seq3995 Length=12643 Score = 95.1 bits (104), Expect = 1e-14 Identities = 98/127 (77%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 42001 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 42060 |||| || | ||||||||||| || || || ||||| | |||||||| |||| || | Sbjct 130 CCAAGTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGA 71 Query 42061 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGA 42120 ||||||||||||| || || | ||||||||||| | || | || |||||||||| ||| Sbjct 70 GCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC-TGA 12 Query 42121 TTTTTTG 42127 | |||| Sbjct 11 ATCTTTG 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542609263418560