Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq9834 107 2e-18 seq14965 89.7 5e-13 >seq9834 Length=29888 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| |||| | | || ||||||| || || || || || ||||||||||| | | Sbjct 143 CCGCCACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAG 202 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | ||||||||||||||||| || |||| | || ||||| ||||||||| Sbjct 203 AGAGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGA 262 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || || || || || ||| || || | || || | || || Sbjct 263 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACC 322 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || |||| || || ||||| |||||||| Sbjct 323 TCAAGGGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 >seq14965 Length=33111 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || || ||||| ||||| | | ||||||| ||||||| | ||||| || || | Sbjct 7858 TTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAATTGCTTCCCAGCGAA 7917 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 |||||| || ||||||||||| ||||| || || || ||||| || || ||| ||| Sbjct 7918 AATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATCTTCGCCTTGACATT 7977 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | || || | || || || | || | ||||| || ||||| || || || Sbjct 7978 GTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTCAC 8037 Query 64432 GAAAATTTGCAT 64443 ||||| ||||| Sbjct 8038 AAAAATCTGCAT 8049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499089669644960