Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq9834 125 7e-24 seq14965 84.2 2e-11 >seq9834 Length=29888 Score = 125 bits (138), Expect = 7e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| || | ||| | |||||||| || || || |||||||| | |||||| | Sbjct 155 CGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCA 214 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| | ||||| || |||||||||||||| || || |||||| Sbjct 215 TCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCCTTCCTTG 274 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| || | |||||||| | |||||| || | ||| | Sbjct 275 TCCTGGATCTTGGCCTTGACGTTG-TCAATGGTGTCCGAAGACTCGACCTCAAGGGTGAT 333 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || ||||| || || || || || ||||| Sbjct 334 GGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/142 (74%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 126974 CCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG- 127032 ||||| ||||||| |||||||| || || || ||||||||||||||| ||| | | || Sbjct 2 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC-TGAATCTTTGC 60 Query 127033 CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 ||| | | || | |||||| | |||||| || | || | || || || || || Sbjct 61 CTTAACGTTATCAATGGTGTCAGATGACTCGACCTCCAGCGTGATTGTCTTTCCAGTAAG 120 Query 127093 AGTTTTTACAAAAATCTGCATG 127114 ||| || ||||||||||||||| Sbjct 121 AGTCTTGACAAAAATCTGCATG 142 >seq14965 Length=33111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | || | ||| | || || || || || |||||||| || Sbjct 8051 CCACCACGGAGTCGAAGGACAAGATGCAGTGTTGATTCCTTCTGGATATTGTAGTCTGAA 8110 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || | || || || || ||||||| ||||||||||| ||||| Sbjct 8111 AGGGTGCGCCCGTCCTCCAATTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGGG 8170 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||| ||| ||| ||| |||| | |||| |||| |||||| | || | Sbjct 8171 ATACCTTCCTTATCCTGGATCTTC-GCTTTAACGTTG-TCGATGGTGTCTGATGATTCCA 8228 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||| ||| | || || || |||| || || || || |||||||| Sbjct 8229 CTTCGAGGGTGATAGTCTTCCCTGTCAATGTCTTCACGAAGATCTGCAT 8277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474972494836160