Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq5859 116 6e-21 >seq5859 Length=97331 Score = 116 bits (128), Expect = 6e-21 Identities = 367/562 (65%), Gaps = 10/562 (2%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 ||||| | |||||| || || ||||| ||||| || ||| ||| | |||||| || Sbjct 76209 AACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAA 76150 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | | ||| ||||||| |||||| || | ||| || |||| ||| || | || Sbjct 76149 AAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCA 76090 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 |||||||| || || || || || || ||||| | || ||||| || | | | Sbjct 76089 GAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGT 76030 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT---CTTTGCGATGCACGGCATGCGC 160150 |||| |||||| |||||| |||||||| |||| || || || ||| | Sbjct 76029 TTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTT---ATACAGGGAATGGTC 75973 Query 160151 TCGACGGCGTTAAACA-ATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAG 160209 |||| ||||| || | || | || | ||| | |||| ||||| ||| | || || Sbjct 75972 TCGATGGCGTCGAAAAGATAT-TCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAG 75914 Query 160210 CTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGT 160269 ||||| | || | ||| | ||||| || || || || ||||||| | Sbjct 75913 TAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACG 75854 Query 160270 CGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCC 160329 ||| ||| | || || || | || ||||| | | || || ||||||| | ||| Sbjct 75853 CGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCC 75794 Query 160330 GTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAG 160389 || | || || ||||| || | || |||||||||||||| | |||| | |||||| Sbjct 75793 ATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAG 75734 Query 160390 TCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGG 160448 | || | ||||| ||| | || | || | ||| | |||||| ||| ||||| | Sbjct 75733 ACGGTTGTGCCAGTCATGT-AGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACG 75675 Query 160449 CAGCCTGAGCAGTTTTGTACAT 160470 ||||| || |||| ||||| Sbjct 75674 AAGCCTCTGCCTTTTTATACAT 75653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794271742815040