Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq14965 104 5e-17 seq9834 104 5e-17 seq14872 89.7 1e-12 >seq14965 Length=33111 Score = 104 bits (114), Expect = 5e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| ||||||||||| |||| ||||||||||| ||||||||| ||||| Sbjct 8571 AGAACTAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAAAGTCCTCCCATCC 8630 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || ||||| || || ||||| ||||| || ||||| || ||| Sbjct 8631 TCGAGCTGTTTCCCAGCGAAAATGAGGCGTTGCTGATCGGGA 8672 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| ||| || |||| | || | || ||||||| ||||| || ||||| Sbjct 7859 TCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAATTGCTTCCCAGCGAAA 7918 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 |||||||| |||||||| || ||| || || || |||||||| ||| || Sbjct 7919 ATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATCTTCGCCTTGACATTG 7978 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | ||||| | | ||||| ||||||||||| ||||| ||||| | || |||||| Sbjct 7979 TCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTCACA 8038 Query 199619 AAAATTTG 199626 ||||| || Sbjct 8039 AAAATCTG 8046 >seq9834 Length=29888 Score = 104 bits (114), Expect = 5e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || |||||| ||||| || ||||| || |||| |||||| |||| | ||| Sbjct 377 CGGAGGCGCAAGACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGAGTA 436 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | ||||| || ||||||||||| ||||||||||||||||||||||| || Sbjct 437 CGCCCATCCTCTAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGG 486 >seq14872 Length=27679 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||||| |||| |||||||| || || | ||||| Sbjct 25067 AGGACAAGGTGGAGGGTTGACTCCTTCTGGATATTGTAGTCGCTCAGCGTACGGCCATCC 25126 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || || || ||||||||||| ||||||||||| || || ||| Sbjct 25127 TCTAGTTGTTTTCCGGCGAAAATGAGACGCTGTTGATCAGGA 25168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177579013135228