Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9834 138 1e-27 seq14965 111 2e-19 seq68235 100 3e-16 seq3995 100 3e-16 seq11775 86.0 7e-12 >seq9834 Length=29888 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | |||||| || ||||| | ||| |||||| ||||| ||||| || | Sbjct 141 TGCCGCCACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAG 200 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || || ||||||||||| ||||| |||||||| ||||| |||| | Sbjct 201 AGAGAGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAG 260 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | | ||||||||| |||||| ||||| ||| | | | ||||| || || Sbjct 261 GAATTCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCCGAAGACTCG 319 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| || || |||||||| || || ||||||||||| Sbjct 320 ACCTCAAGGGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 >seq14965 Length=33111 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| ||||| |||||||||||||| || || |||||| |||| || Sbjct 8069 ACAAGATGCAGTGTTGATTCCTTCTGGATATTGTAGTCTGAAAGGGTGCGCCCGTCCTCC 8128 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||||| ||||| || ||||| |||||||| || | || | | ||||| ||| | Sbjct 8129 AATTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGGGATACCTTCCTTATCCTGG 8188 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | ||| | | | ||||| |||||||| || | ||||| || || Sbjct 8189 ATCTTC-GCTTTAACGTTGTCGATGGTGTCTGATGATTCCACTTCGAGGGTGATAGTCTT 8247 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || || || ||||| ||||| Sbjct 8248 CCCTGTCAATGTCTTCACGAAGATCTGCAT 8277 >seq68235 Length=344 Score = 100 bits (110), Expect = 3e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || || |||||||| |||||||| |||| ||||| ||||| || || || Sbjct 109 CTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCTCGAGTTGCTTACCAGCAAA 50 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 ||||||||||||||||| | ||| | || |||||||||| ||||| Sbjct 49 GATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT 2 >seq3995 Length=12643 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| || || || || ||||| || |||| ||||||||||| || Sbjct 119 GTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGAGCTGCTTACCA 60 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 || || ||||||||||||||||| | ||| | || |||||||||| ||||| Sbjct 59 GCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT 7 >seq11775 Length=34147 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| || | |||| ||||||||| || || |||||| |||||||| |||| ||| Sbjct 24235 ACCAAGTGGAGTGTAGACTCCTTTTGTATGTTATAGTCGCTGAGAGTGCGGCCGTCCTCG 24176 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||||||||||||| || |||| |||||| ||||| Sbjct 24175 AGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTC 24141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564610391875680