Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq5859 223 3e-53 seq9834 122 9e-23 seq11775 82.4 8e-11 >seq5859 Length=97331 Score = 223 bits (246), Expect = 3e-53 Identities = 436/637 (68%), Gaps = 17/637 (3%) Strand=Plus/Minus Query 132813 TTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT-CGGCCGTT 132871 |||||||||| | ||||| || |||| ||| | | || | | || | | ||| || Sbjct 76282 TTGCTCGATGACAACCGCTTCTGTGATGATAAACTTCACA-GTGTCGGGATGCGGACGGC 76224 Query 132872 GCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAA 132931 || | ||| |||||| |||||| || || || |||| ||||| || | | Sbjct 76223 GCTTAAGATGACTGAACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGA 76164 Query 132932 TGAGTTCGTTGCTGAAA--GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATAT 132989 | || ||||| ||||| |||||||| |||||||| || || || || | ||| || || Sbjct 76163 TAAGCTCGTT--TGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGAT 76106 Query 132990 GGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTC 133049 || ||||| || || || |||| ||| ||||| || ||||| ||||||| || || Sbjct 76105 GGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTC 76046 Query 133050 GCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGAC 133109 ||||| || | | |||| || ||||| ||||| ||||| || |||||| || | Sbjct 76045 ACCGAATGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTAT 75986 Query 133110 GCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTC-TTCCGAGGAACGC---A 133165 || || || || |||||||||| || | || ||||| ||||| || | | Sbjct 75985 ACAGGGAATGGTCTCGATGGCGTCGAAAA----GATATTCTCGTTCCGTGGCATCTTTGA 75930 Query 133166 CGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAA 133225 ||| ||||||||||| || || | || ||||| | ||| ||||| ||||| | Sbjct 75929 TGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGA 75870 Query 133226 AGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGAT 133285 | ||||| || || ||||| || | || || ||||| | | || | ||| | || | Sbjct 75869 AACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGT 75810 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | || || || || || || || ||||| || || || || || ||||||||| | Sbjct 75809 TCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGAC 75750 Query 133346 GCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 | ||||||||||| | || | |||||| | |||||||| || |||| ||| | Sbjct 75749 GTTCGTTGTCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTT 75690 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || ||||||||||||| ||||| || ||||| ||||| Sbjct 75689 CGGCGGTCCAAAACGAAGCCTCTGCCTTTTTATACAT 75653 >seq9834 Length=29888 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || || || ||||||||| | || |||||| | | Sbjct 369 ATGCAAATCTTCGTCAAGACGCTGACAGGAAAGACCATCACCCTTGAGGTCGAGTCTTCG 310 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || |||||||| |||| || Sbjct 309 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCA 251 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | |||| ||| ||||| ||||| || || | ||||| ||| || ||||| Sbjct 250 GCAACGCTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACTCTCTCTGATTACAA 191 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || ||| | || ||||| || | |||||| Sbjct 190 CATCCAGAAGGAGTCTACCCTTCATCTCGTTTTGCGTCTGCGTGGCGGC 142 >seq11775 Length=34147 Score = 82.4 bits (90), Expect = 8e-11 Identities = 85/110 (77%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 |||| || ||||||||||| || || | || ||||| ||||| || |||| ||||| | Sbjct 24133 TCCCTCCTGACCAACAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACTC 24192 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| |||||| ||||| |||||||| | || || || ||||| || ||| Sbjct 24193 TCAGCGACTATAACATACAAAAGGAGTCTACACTCCACTTGGTTCTCCGT 24242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499617083010560