Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5859 111 2e-19 seq4769 98.7 1e-15 >seq5859 Length=97331 Score = 111 bits (122), Expect = 2e-19 Identities = 358/542 (66%), Gaps = 24/542 (4%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAA---GCAAAGTCCAGGCATGAGTCCTCTT 119570 || ||||| ||| ||| ||||| || |||| | ||| ||||||||||| || | Sbjct 76179 CCCTCATCGCGACTGATAAGCTCGTT--TGAAAAGGTCAAG-CCAGGCATGAGACCACGC 76123 Query 119571 TTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCG 119630 ||||| | ||| ||||||| || |||||| || |||||||| || ||| |||| Sbjct 76122 TTCTTCAACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCG 76063 Query 119631 AAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTT-GTCGAA---CCACTTGAGAGCCCA 119686 || || | | || ||| | || | |||| || |||| | |||| || ||||| Sbjct 76062 AAGGCCACCAACCGTTCACCGAATG-TCGAATGTTTGTCGGATATCCACCGCAGGGCCCA 76004 Query 119687 GTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTT-TT 119745 || ||||| |||| ||| ||||| | || | |||||| |||||||| | |||| || Sbjct 76003 GTCAGCCTTTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAAAAGATA-TTCTCGTT 75945 Query 119746 CAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCATT- 119804 | | |||| || || || | || |||||| ||||||||||| |||| || Sbjct 75944 CCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTT 75885 Query 119805 ---TCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCA 119861 |||| | || || | | || || | || ||||| | || ||| ||||||| Sbjct 75884 CCATCATAATTTG---GA-AACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTTT 75829 Query 119862 GCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAG 119921 | ||| | | || || ||| ||| || ||||| || | |||||||| || | Sbjct 75828 GAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAGA 75769 Query 119922 ATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTCCAGTCGTCCATATCT 119978 | | ||||| | |||| || |||||||| ||| | |||||| | | ||| Sbjct 75768 ACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGGTTGTGCCAGTCATGTAGATCC 75709 Query 119979 TTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCC 120038 || || | |||| |||||| || ||||| || || |||||||||||| | || | Sbjct 75708 TTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGCCTCTGCCTTTTTATACATTTGC 75649 Query 120039 CA 120040 || Sbjct 75648 CA 75647 Score = 100 bits (110), Expect = 3e-16 Identities = 334/506 (66%), Gaps = 18/506 (4%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAA-GCAAAGTCCAGGCATGAGTCCTCTTTT 119572 || ||||| ||| || ||||||||| ||| | ||| |||||||||||||||| ||| Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAG-CCAGGCATGAGTCCTCGTTT 74193 Query 119573 CTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAA 119632 ||| | |||||| || || || ||| || || || ||||| || || || || Sbjct 74194 CTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAA 74253 Query 119633 AGCGAATAGACGCTCAGCAAAAGGTCGAGACTT-GTCG---AACCACTTGAGAGCCCAGT 119688 || | || ||||| ||||||| | || || |||| | ||| || |||||||||| Sbjct 74254 TGCTATGAGGCGCTCCGCAAAAGAT-GACTGTTCGTCGGCAATCCATTTAAGAGCCCAGT 74312 Query 119689 TGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTCAG 119748 ||| || ||| | || |||| |||| || || |||||||| || || || | Sbjct 74313 CGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGAT 74372 Query 119749 CACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCATTTCAT 119808 | ||| || | ||| ||||||| || ||| || || || ||| | |||| Sbjct 74373 GAGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTCGA 74432 Query 119809 TGTGTGAC-TGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAAA 119867 | |||| ||| | |||| || | || ||||| | | ||| ||||| | || ||| Sbjct 74433 T-CATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTC--CTGCGAAA 74489 Query 119868 TTGTTGTTGATA---TTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATG 119924 | || | ||| |||||| ||||| |||||||| | ||||| || || | || Sbjct 74490 ATCTT-TCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATA 74548 Query 119925 TACTTTATGAATTTCTGTTCATTATCGTTGAG-TG--TTTTCCAGTCGTCCATATCTTTA 119981 | || || | |||| | | |||| || || |||||||||| | ||| | Sbjct 74549 TGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGT 74608 Query 119982 GACAAGTCCACCTCTTCAGCTGTCCA 120007 || | ||||| ||||| || ||||| Sbjct 74609 GAAAGGTCCAATTCTTCTGCGGTCCA 74634 >seq4769 Length=19565 Score = 98.7 bits (108), Expect = 1e-15 Identities = 203/298 (68%), Gaps = 12/298 (4%) Strand=Plus/Minus Query 110104 TCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCA 110163 || || |||||||| ||||||| ||||||||| || | ||||||||| ||||| || Sbjct 7635 TCAGCGAGACCCTGCACACCGATACCAATGGGACGGTTGCGCATGTTAGATCGTCGGGC- 7577 Query 110164 GTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTC 110220 ||| ||||||||| | ||| |||||||| |||||||| || || ||| | Sbjct 7576 --TTCAGGGACGGGGTAATAATTGATGTCGATGATGCGATTGAGGTTGAACGCAACAACC 7519 Query 110221 TTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTG 110280 || || | ||||| || | | | ||||| | ||| | || | || || | || Sbjct 7518 TTGGTAACGTCATGAAGCCTTTGGAAATCGTA--TTTGCCGCTGGTGAT-GAAAG---TG 7465 Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| || || ||||| ||||| |||| ||||| || || ||| || | Sbjct 7464 GGAAGAGCGATCGAAGCAAGGTTGCAAACAGCGGTCTCTTCCGGCGAGGAGTACTCGATG 7405 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGG 110398 || || || || | || || ||| || ||| | |||||| ||||||||||||| Sbjct 7404 ATCTCGGTGCAAAGATTCGAGGACTTGATCGTACCGAGGTTCTTTTGATTCGATTTGG 7347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588321618215200