Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5859 104 3e-17 >seq5859 Length=97331 Score = 104 bits (114), Expect = 3e-17 Identities = 275/415 (66%), Gaps = 4/415 (1%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| || |||||| ||||| ||||| | ||| |||||||| || || ||| Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 ||||||||| | ||||| |||||| |||||||| || || || || || ||||| Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCCATTT 117470 || | |||||||| || || || || || || | ||| |||||| | ||||| | Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGA-TGACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTC 74313 Query 117471 CGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCAGA 117530 || || | || | ||| || | |||| || || || || | || || || | Sbjct 74314 GGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGATG 74373 Query 117531 TCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATTTC-AT 117589 ||| || | |||| | ||||| | ||||| ||||| ||| | |||| || Sbjct 74374 AGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTCGAT 74433 Query 117590 TATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCGCAAAAT 117649 ||| | |||| || | ||||| | || ||||| | || ||||| | || ||| Sbjct 74434 CATGAC-TTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAAATC 74492 Query 117650 TGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGAT 117704 | | | | | || ||| ||||| ||||||||| | || || || || || || Sbjct 74493 TTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAAT 74547 Score = 86.0 bits (94), Expect = 7e-12 Identities = 333/512 (65%), Gaps = 11/512 (2%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| | ||||||||| || ||||| || ||||| ||| | ||| ||||||||||| Sbjct 76186 GTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACC 76127 Query 117345 CCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 117403 |||||||||||||| | || | ||| |||||| || ||||| ||||| || || ||| Sbjct 76126 ACGCTTCTTCAACCAGAAGATGGACGC-GAATGATCCAGAGAAAAAGATGCCTTCGACAG 76068 Query 117404 ACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATT 117462 || || || | | || || |||| | ||| ||||| | | ||| || Sbjct 76067 CGGCGAAGGCCACCAACCGTTCACCGAATG-TCGAATGTTTGTCGGATATCCACCGCAGG 76009 Query 117463 GCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTC 117522 ||||| | ||||| || ||||| || | || | |||||| || || || ||| Sbjct 76008 GCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAA-AAGATATTC 75950 Query 117523 T-TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAAC 117581 | ||| | |||| || ||||| |||| || | | || || || ||| |||| Sbjct 75949 TCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAAT 75890 Query 117582 CATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCAT 117640 ||| ||| || ||| | ||||||| | |||||||| | || ||||| | Sbjct 75889 GTTTTCCATCAT-AATTTGGAAACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGT 75831 Query 117641 CCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCA 117700 | ||| | | | || |||||| ||| || ||||| ||| | || ||||| || | Sbjct 75830 TTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGA 75771 Query 117701 GGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGAT 117757 | | | ||||| | ||| || || || | || | | |||||| | |||| Sbjct 75770 GAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGGTTGTGCCAGTCATGTAGAT 75711 Query 117758 CTTTGGACAAATCAACTTCTTCCGCAGTCCAA 117789 | ||||| | ||| | ||||| || |||||| Sbjct 75710 CCTTGGAAAGATCCATCTCTTCGGCGGTCCAA 75679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589325301832160