Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq9834 172 1e-37 seq14965 114 3e-20 seq68235 104 5e-17 seq3995 93.3 9e-14 seq14872 84.2 5e-11 >seq9834 Length=29888 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| || ||||| || ||||| || || || |||||||| | ||||| | ||||| Sbjct 157 CAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATC 216 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| |||||||| || ||||| || | ||||| || || |||||||| ||||| ||||| Sbjct 217 TTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCCTTCCTTGTC 276 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || || ||||||||| ||||||||||||||| || || |||||||| | || Sbjct 277 CTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGT 336 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||||||| || || ||||| | |||||| Sbjct 337 CTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 >seq14965 Length=33111 Score = 114 bits (126), Expect = 3e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194930 AAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTT 194989 || ||||||| | ||| || || || || || ||||| | ||| || | ||| |||| Sbjct 7839 AACCAAGGTGCAAGGTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTT 7898 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 | | ||||| || ||||| || || ||||| ||||| || ||||| || || ||||||| Sbjct 7899 CCAATTGCTTCCCAGCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTT 7958 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 |||| || |||||| || ||||| ||||||||| || || || | || | |||| Sbjct 7959 GAATCTTCGCCTTGACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCT 8018 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || ||||| || || || || | ||||| Sbjct 8019 TCCCCGTCAAGGTCTTCACAAAAATCTGCAT 8049 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| || ||||| || |||||||| || |||| || || | ||||| || Sbjct 8296 AACCAGATGAAGGGTCGACTCCTTCTGAATATTATAGTCGGACAGCGTACGACCATCCTC 8355 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 || ||||| || |||||||| || ||||||||||| ||||| |||| Sbjct 8356 TAGTTGCTTGCCAGCGAAGATTAGACGTTGTTGGTCGGGAGGGATGC 8402 >seq68235 Length=344 Score = 104 bits (114), Expect = 5e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| |||||||||||||| || ||||| || || |||| |||||| | || || |||| Sbjct 125 CAAGATGAAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCTCGA 66 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 | |||||||| || ||||| | || || ||||| || || ||||| || ||||| |||| Sbjct 65 GTTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAA 6 Query 195053 TTTTT 195057 | ||| Sbjct 5 TCTTT 1 >seq3995 Length=12643 Score = 93.3 bits (102), Expect = 9e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||| ||| || || || || ||||| | |||||| | || || |||||||| Sbjct 126 GTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGAGCTG 67 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| | || || ||||| || || ||||| || ||||| ||||| || Sbjct 66 CTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT 7 Query 195057 T 195057 | Sbjct 6 T 6 >seq14872 Length=27679 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096 ||||| ||||| || ||||| |||||||| |||||||||||||| |||||| ||| Sbjct 25238 CCTTCCTTGTCCTGGATTTTGGCTTTGACGTTGTCAATGGTGTCCGACGATTCCACCTCA 25297 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | |||||| || || | || || ||||| | |||||| Sbjct 25298 AGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATTTGCAT 25341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108218093230028