Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03]
88,884 sequences; 131,718,925 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq14965 104 2e-17
seq3995 89.7 3e-13
>seq14965
Length=33111
Score = 104 bits (114), Expect = 2e-17
Identities = 151/212 (71%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 34772 AACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCAT 34830
||||||| || | |||||||| ||||| |||||||| || |||||| | || | || |
Sbjct 7839 AACCAAGGTGCAAGGTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTT 7898
Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890
||| || || || || || || || ||||||||||| | || | |||||||||||
Sbjct 7899 CCAATTGCTTCCCAGCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTT 7958
Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||||| ||||| | |||| || | ||| || || | || || || |
Sbjct 7959 GAATCTTCGCCTTGACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCT 8018
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| ||||| | ||||||||||| |||||||||
Sbjct 8019 TCCCCGTCAAGGTCTTCACAAAAATCTGCATA 8050
>seq3995
Length=12643
Score = 89.7 bits (98), Expect = 3e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 34774 CCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833
||||||||| ||||| || ||||| |||||||| |||||||| | || | || || |
Sbjct 130 CCAAGTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGA 71
Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893
|||| || || ||||| || | || |||||||| |||| | ||||||||||| ||
Sbjct 70 GCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAA 11
Query 34894 TCTT 34897
||||
Sbjct 10 TCTT 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324281932942752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |