Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq14965 104 2e-17 seq3995 89.7 3e-13 >seq14965 Length=33111 Score = 104 bits (114), Expect = 2e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 34772 AACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCAT 34830 ||||||| || | |||||||| ||||| |||||||| || |||||| | || | || | Sbjct 7839 AACCAAGGTGCAAGGTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTT 7898 Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890 ||| || || || || || || || ||||||||||| | || | ||||||||||| Sbjct 7899 CCAATTGCTTCCCAGCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTT 7958 Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||||| ||||| | |||| || | ||| || || | || || || | Sbjct 7959 GAATCTTCGCCTTGACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCT 8018 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | ||||| | ||||||||||| ||||||||| Sbjct 8019 TCCCCGTCAAGGTCTTCACAAAAATCTGCATA 8050 >seq3995 Length=12643 Score = 89.7 bits (98), Expect = 3e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 34774 CCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 ||||||||| ||||| || ||||| |||||||| |||||||| | || | || || | Sbjct 130 CCAAGTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGA 71 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 |||| || || ||||| || | || |||||||| |||| | ||||||||||| || Sbjct 70 GCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAA 11 Query 34894 TCTT 34897 |||| Sbjct 10 TCTT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324281932942752