Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq5859 176 5e-39 >seq5859 Length=97331 Score = 176 bits (194), Expect = 5e-39 Identities = 358/527 (68%), Gaps = 5/527 (1%) Strand=Plus/Plus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||| || | ||| || | |||||||| ||||| || |||||||| ||||||| ||| Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || ||||| ||||||| || |||||||| || || ||||| ||||| ||||| ||||| Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCA 19161 || | || | || || || | | | | ||||||||| || ||||| || Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTCG 74314 Query 19162 GCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCT 19221 || || | || ||||| || || || || || | | || || | | || | || Sbjct 74315 GCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGATGA 74374 Query 19222 GTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATA 19281 | |||||| || |||| ||| || | ||| || |||| ||||| || ||||| || Sbjct 74375 GGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTCGATC 74434 Query 19282 GCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTAC-AAAATCT 19340 | |||||||| || || || | ||||||| | || ||||| || | ||||||| Sbjct 74435 ATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTC-CTGCGAAAATCT 74493 Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400 ||| | | |||||||| || || ||||| || || ||||| || | | ||| Sbjct 74494 TTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATATGAGA 74553 Query 19401 AATAAAATGTTTTTCATCTGAGGTTAA-TG--TATTCCAATCATTAATATCTTTAGATAA 19457 ||||||| ||| || | | ||| || | ||||| || | | ||| | || | Sbjct 74554 GATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGTGAAAG 74613 Query 19458 ATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACA 19504 || | |||||| | |||||||| || ||||||||||| || |||| Sbjct 74614 GTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 Score = 161 bits (178), Expect = 1e-34 Identities = 383/577 (66%), Gaps = 5/577 (1%) Strand=Plus/Minus Query 18942 AAGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAA 19001 |||||| | |||| ||| || || ||||| || | ||||| || | ||| || | Sbjct 76219 AAGATGACTGAACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAG 76160 Query 19002 TTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGC 19061 || || ||||| || || |||||||| || || | || || |||||||| || || || Sbjct 76159 CTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGC 76100 Query 19062 AAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATA 19121 ||||||||||| || || || ||||| || || || || || || | | ||| || | Sbjct 76099 GAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAA 76040 Query 19122 ACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGG 19181 | | || || | ||||| ||| ||||| |||||||| |||| ||| || Sbjct 76039 TGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGG 75980 Query 19182 CATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATC 19241 || ||||| || | | || ||||| || || | |||||| | || | || Sbjct 75979 AATGGTCTCGATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTC 75920 Query 19242 TATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAA 19301 || | || ||| | || || ||||| ||||| || || || || ||||| || Sbjct 75919 GATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAA 75860 Query 19302 ACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAAC 19361 ||| | ||||| | | || ||||| | |||| || || | | || |||||||| Sbjct 75859 ACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAAC 75800 Query 19362 TATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGA 19421 ||| |||||| ||||| || || || | ||||| || ||||| ||| | || Sbjct 75799 TATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGT-TGT 75741 Query 19422 GGTTAA----TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCC 19477 ||| | | | ||| |||| | ||| || || | ||| | ||||| | |||| Sbjct 75740 CGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCC 75681 Query 19478 AAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 |||| ||||||||||| ||||||||||| | |||||| Sbjct 75680 AAAACGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561484269017760