Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7114 113 4e-19 seq19664 95.1 1e-13 >seq7114 Length=50987 Score = 113 bits (124), Expect = 4e-19 Identities = 187/265 (71%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 550319 TCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTT 550378 || || ||| | ||||| ||||||||||| |||| ||||| | || || |||| Sbjct 10896 TCTCCTGAAGAGATTTCGTCTATGGTTTTGTTGAAGATGAAGGAGACTGCTGAGGCTTAC 10955 Query 550379 GTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACA 550437 | || ||| || || | | || || | || || || || ||||| || || ||||| Sbjct 10956 CTCGG-CAATAACGTCAACAACGCTGTCGTCACCGTCCCTGCTTATTTCAACGATTCACA 11014 Query 550438 ACGTCAAGCTACTAAAGATGCTGG-ACGTATTGCTGGACTTAATGTTCTTCGTATTATCA 550496 |||||| || || || || ||||| ||| ||| |||| | || || |||||||| |||| Sbjct 11015 ACGTCAGGCCACCAAGGACGCTGGTACG-ATTTCTGGTATGAACGTCCTTCGTATCATCA 11073 Query 550497 ATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTA 550556 | || ||||||||||| || | || || || || || ||| | || | |||| | Sbjct 11074 ACGAGCCTACTGCTGCCGCCATCGCGTACGGTCTCGACAAAAAGGTTGTTGGCGAACGCA 11133 Query 550557 ATGTACTCATCTTTGATTGTGGAGG 550581 | ||||| ||||||||| |||||| Sbjct 11134 ACGTACTTATCTTTGATCTTGGAGG 11158 >seq19664 Length=17166 Score = 95.1 bits (104), Expect = 1e-13 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| || || || || ||||| | || || ||||| ||||| |||||| Sbjct 6642 GCTGTTATCACTGTTCCTGCTTACTTCAATGATGCCCAGCGCCAAGCAACTAAGGATGCT 6583 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | ||||||||||| ||||||| || | || |||||||| || || || || || Sbjct 6582 GGTCAAATTGCTGGACTAGATGTTCTCCGGGTGATTAATGAACCCACGGCAGCGGCCCTG 6523 Query 550520 GCATATGGACTTGAT 550534 || ||||| |||||| Sbjct 6522 GCTTATGGTCTTGAT 6508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4024595413213160