Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq5859 149 7e-31 >seq5859 Length=97331 Score = 149 bits (164), Expect = 7e-31 Identities = 356/537 (66%), Gaps = 5/537 (1%) Strand=Plus/Plus Query 37197 CCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttttt 37256 || ||||| | ||| || | |||||||| || || || || ||||| | |||| ||| Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 37257 ttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAAT 37316 || | ||||||||| ||||| || ||||| || || || || ||||||||||| |||||| Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 37317 GCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCT 37376 |||| || || | |||| ||| | || | ||||||||| | ||| || Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTCG 74314 Query 37377 GCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCA 37436 || || || ||||| || ||||||||||| | || || | || | | Sbjct 74315 GCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGATGA 74374 Query 37437 CTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATA 37496 |||| | | || |||||||| || ||| ||| |||| || || || ||||| || Sbjct 74375 GGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTCGATC 74434 Query 37497 GCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTC 37556 | ||||| ||||| || || | ||||| | | |||||| || | |||| || Sbjct 74435 ATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAAATCTT 74494 Query 37557 TTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTT 37616 | | | ||||||||| || || ||||| || || || |||||||||| || Sbjct 74495 TCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATATGAGAG 74554 Query 37617 ATAAAATGTCTTTCATCA----TTTGATAATTTTTTCCAATCATTAATATCTTTTGATAA 37672 ||||||| | ||| ||| || | | | |||||||| || | | ||| | ||| | Sbjct 74555 ATAAAATAACGTTCGTCAGCGTTTAGCTGA-TTTTTCCAGTCCATGAGATCATGTGAAAG 74613 Query 37673 ATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAAT 37729 || | ||| || |||||||||| |||| ||| || |||| | |||||| Sbjct 74614 GTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACAGCTGCCAAAT 74670 Score = 147 bits (162), Expect = 3e-30 Identities = 368/557 (66%), Gaps = 3/557 (1%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 |||| || || || ||||| || | ||| ||||| | ||| || | || || ||| Sbjct 76209 AACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAA 76150 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 ||||| || || ||||| | ||| | || || | ||| || || | || || |||||| Sbjct 76149 AAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCA 76090 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || || || || ||||| || || || || || || | ||| |||||| || ||| Sbjct 76089 GAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGT 76030 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | || || ||||| | ||| || |||||| || | ||| ||| || || Sbjct 76029 TTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCG 75970 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 || || | || ||| | | | ||| |||| | || ||||| || || |||| Sbjct 75969 ATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGG 75910 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 || | || |||||||| ||||| || || || ||||| || ||||| | ||| Sbjct 75909 GAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACGCGCT 75850 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 || | | ||| || ||||| ||||||||| | | ||| |||||||||||||||||| Sbjct 75849 TCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCA 75790 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA-AT 37643 ||||| ||||| || ||||||| || ||||| | ||| | | |||| | Sbjct 75789 GACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGG 75730 Query 37644 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCC 37703 || | ||| |||| | ||| || || | ||| | || || |||||||||| ||| Sbjct 75729 TTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGCC 75670 Query 37704 AATGCACGTTTATACAT 37720 ||| ||||||||| Sbjct 75669 TCTGCCTTTTTATACAT 75653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591658706419360