Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq14965 98.7 8e-16 seq3995 91.5 1e-13 seq68235 84.2 2e-11 >seq14965 Length=33111 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 48570 GTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCG 48629 ||||| || || || || || |||||||| || | || |||| ||||| ||||| || Sbjct 7853 GTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAATTGCTTCCCA 7912 Query 48630 GCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTT 48689 || || || || || || || || | |||| ||||||||||| |||||| || Sbjct 7913 GCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATCTTCGCCTTG 7972 Query 48690 ACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTT 48749 ||| | | | || || | ||| ||||||| ||| || || || |||||||| || Sbjct 7973 ACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCCGTCAAGGTC 8032 Query 48750 TTTACAAAAATCTGCAT 48766 || |||||||||||||| Sbjct 8033 TTCACAAAAATCTGCAT 8049 >seq3995 Length=12643 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48559 CCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCA 48618 |||| || || |||||||| || || || || ||||| || ||| | ||| |||| || | Sbjct 130 CCAAGTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGA 71 Query 48619 ACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAA 48678 ||||||||| ||||| |||| ||||| || || | || | |||||||||||| || Sbjct 70 GCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAA 11 Query 48679 TCTTT 48683 ||||| Sbjct 10 TCTTT 6 >seq68235 Length=344 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 48626 ACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTG 48685 ||| ||||| |||| ||||| || || | || | |||||||||||| ||||||| Sbjct 344 ACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGC 285 Query 48686 TTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAA 48745 || ||| | | | || |||| ||||||||||| ||| ||||| ||||| || | Sbjct 284 CTTCACATTGTCAATGGTATCCGACGACTCCACCTCCAGCGTGATCGTCTTTCCAGTAAG 225 Query 48746 AGTTTTTACAAAAATCTGCAT 48766 ||| || ||||| |||||||| Sbjct 224 AGTCTTGACAAAGATCTGCAT 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380524940297532