Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5859 167 4e-36 seq4769 86.0 1e-11 >seq5859 Length=97331 Score = 167 bits (184), Expect = 4e-36 Identities = 375/563 (67%), Gaps = 3/563 (1%) Strand=Plus/Minus Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 |||| ||| || || || |||||| || || || || ||||| ||| |||| || ||| Sbjct 76206 AGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAAAAG 76147 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 | |||||||||| || | || || | |||||| || | |||||| || |||||| Sbjct 76146 GTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCAGAG 76087 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 || |||||||| || || || ||||| || | || || ||||| | | | ||| Sbjct 76086 AAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGTTTG 76027 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 || || ||||| || |||||||| ||||| ||| || || || || ||||| ||| Sbjct 76026 TCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCGATG 75967 Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCG 48424 || ||| || | | | || || || | || || || || | | Sbjct 75966 GCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGGGAG 75907 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 || |||| ||||| | || || || || ||||| |||||||| | || || Sbjct 75906 TAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACGCGCTTCC 75847 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || || ||||| | || || ||||| || || |||||||| ||||||||||| || Sbjct 75846 GCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCAGAC 75787 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT- 48603 || || ||||| || || ||||| | |||||| || ||||||| | ||||| || Sbjct 75786 GCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGGTTG 75727 Query 48604 --CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 |||| | |||| || ||| || |||| ||||| | ||||| || || || | Sbjct 75726 TGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGCCTCT 75667 Query 48662 GCTTTTTTGTACATGCCCCATAT 48684 || ||||| ||||| |||||| Sbjct 75666 GCCTTTTTATACATTTGCCATAT 75644 >seq4769 Length=19565 Score = 86.0 bits (94), Expect = 1e-11 Identities = 144/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 |||| || ||||| | ||||||||||||||| |||| ||||||||| ||| ||| || Sbjct 7731 GCCTCGAGTGCAGCATGGTAGATGGTTTCAAAGATCTGAATGTTGAGCTGCTTCGCCACT 7672 Query 213267 GGGGACGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 ||||| ||| ||||| | | || | ||| ||||| || ||||| || ||||| Sbjct 7671 GGGGAATCGAATGGCATCCGTAGAGCCAT-GAAGGTGTCAGCGAGACCCTGCACACCGAT 7613 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 || ||||| | || | || |||||| | | | || || | ||||||| | ||| Sbjct 7612 ACCAATGGGACGGTTGCGCATGTTAGATCGTCGGGC-TTCAGGGACGGGGTAATAATTGA 7554 Query 213385 AGTCGATGATCTTGTTGAGGTTG 213407 ||||||||| ||||||||| Sbjct 7553 TGTCGATGATGCGATTGAGGTTG 7531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930497820482560