Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5859 178 2e-39 seq4769 87.8 3e-12 >seq5859 Length=97331 Score = 178 bits (196), Expect = 2e-39 Identities = 385/571 (67%), Gaps = 19/571 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | ||||| || ||||| | || ||||||||||||||||| ||||| Sbjct 75644 ATATGGCAAATGTATAAAAAGGCAGAGGCTTCGTTTTGGACCGCCGAAGAGATGGATCTT 75703 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTT----TCT 25589 ||||||| | | | |||| || | ||| ||| || | ||||| ||| Sbjct 75704 TCCAAGGATCTACATGACTGGCACAACCGTCTCAACGACAACGAACGTCATTTCATCTCT 75763 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649 || || | | || ||||| ||||| |||||||| ||||| || ||||| || || Sbjct 75764 CATGTTC----TCGCGTTCTTCGCAGCGTCTGATGGGATAGTTAATGAGAACCTCCTTGA 75819 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 ||| || | | ||||| || | ||| || ||||||||||||||||| || Sbjct 75820 GAGGTTTTCAAACGAAGTCCAAGTTGCGGAAGCGCGTTGTTTCTACGGTTTCCAAATTAT 75879 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA 25766 || ||||| | ||||| ||| || || || || || || ||||| | ||| Sbjct 75880 GATGGAAAACATTCACTCCGAGACCTACTCC---CTACTCATCGACACTTACATCAAAGA 75936 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 | | | || |||| || || | ||||||||| ||| ||| | || ||| | || Sbjct 75937 TGCCACGGAACGAGAATATCTTTTCGACGCCATCGAGACCATTCCCTGTATAAAGCGAAA 75996 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGG 25885 ||| |||||| || |||||| | | | || | | || || || || ||| ||| Sbjct 75997 GGCTGACTGGGCCCTGCGGTGGAT-ATCCGACAAACATTCGACATTCGGTGAACGGTTGG 76055 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | ||||| || ||||| || |||||||||||| || || || ||| ||||||||||| Sbjct 76056 TGGCCTTCGCCGCTGTCGAAGGCATCTTTTTCTCTGGATCATTCGCGTCCATCTTCTGGT 76115 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 | ||| || || |||||| || || |||||| |||||||| ||||| | || | Sbjct 76116 TGAAGAAGCGTGGTCTCATGCCTGGCTTGACCTTTTCAAACGAGCTTATCAGTCGCGATG 76175 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 ||||| | |||| |||||| || ||| |||| Sbjct 76176 AGGGTATGCACACAGATTTCGCGTGCTTGCT 76206 >seq4769 Length=19565 Score = 87.8 bits (96), Expect = 3e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || ||||| ||||||||||| ||||||||| ||||||| ||| ||| | || ||| Sbjct 7725 AGTGCAGCATGGTAGATGGTTTCAAAGATCTGAATGTTGAGCTGCTTCGCCACTGGGGAA 7666 Query 221480 GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATG 221539 ||| ||||| || || | ||| ||| || || ||||| || |||||||| ||| Sbjct 7665 TCGAATGGCATCCGTAGAGCCATGAAGGTGTCAGCGAGACCCTGCACACCGATACCAATG 7606 Query 221540 GGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598 || | || | | |||| | | || | ||||| || ||||| ||| | |||| |||||| Sbjct 7605 GGACGGTTGCGCATGTTAG-ATCGTCGGGCTTCAGGGACGGGGTAATAATTGATGTCGAT 7547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927812806984960