Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq19664 109 4e-18 seq9834 105 4e-17 >seq19664 Length=17166 Score = 109 bits (120), Expect = 4e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || || |||||||| || || || |||||| | || || ||||||||||| ||||| Sbjct 6642 GCTGTTATCACTGTTCCTGCTTACTTCAATGATGCCCAGCGCCAAGCAACTAAGGATGCT 6583 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || |||||| || || ||||| | || | ||||||||||| || ||||| || || Sbjct 6582 GGTCAAATTGCTGGACTAGATGTTCTCCGGGTGATTAATGAACCCACGGCAGCGGCCCTG 6523 Query 474857 GCTTATGGTCTTGAT 474871 ||||||||||||||| Sbjct 6522 GCTTATGGTCTTGAT 6508 >seq9834 Length=29888 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | || |||||||| ||| || || | || ||||||| ||||| Sbjct 148 ACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGT 207 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| ||||| ||||| ||||| | ||||| ||||| ||||||||||| Sbjct 208 GCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCC 267 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| || ||||| ||||| ||||| || || | | | | |||| Sbjct 268 TTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGA-CCTCAA 326 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || || || || ||||| ||||| ||||| Sbjct 327 GGGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTG 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3264366533974832