Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4769 89.7 3e-13 >seq4769 Length=19565 Score = 89.7 bits (98), Expect = 3e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 25943 TCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTC 26002 || || ||||| | ||||||||| | |||||| || | ||| ||||||||||| ||| Sbjct 7015 TCCGGTATCCAGAGTGCATAAAACAGATCTCTTGCGCGAGCTTCCTCTTTTCCGTGGTTC 6956 Query 26003 TTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA 26062 || | || || | |||||| || ||||| | |||||||||||| | ||| || | ||| Sbjct 6955 TTCCTCAGGTCAATGAAATCGAAGATATCCGCGTGCCATGGTTCGATATAAATCGTGAAA 6896 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGT 26106 ||| || ||| || |||||||| || || | ||||| Sbjct 6895 GCACCAGGTCGTTTGTTACCCCCTTGATCGACATACCGAGCAGT 6852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252765888410300