Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5859 104 3e-17 >seq5859 Length=97331 Score = 104 bits (114), Expect = 3e-17 Identities = 275/415 (66%), Gaps = 4/415 (1%) Strand=Plus/Minus Query 64798 ATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAATTTT 64857 || || || || || || | ||||||||| ||||| ||| || | | | | | ||| Sbjct 74547 ATTCTTGCTTTTTTCGCGGCGTCCGATGGCATTGTCAATGAAAACCTTATTGAAAGATTT 74488 Query 64858 GCGGATGAAGTGCAGATAAGCGAAGCGCGCTCATTCTACGCATATCAATGCCATAAT-GA 64916 || | ||||| || | ||||| || | ||||| | || |||| | ||| || || Sbjct 74487 TCGCAGGAAGTTCAAGTCGCAGAAGCCCGTTGCTTCTATGGATTTCAA-GTCATGATCGA 74429 Query 64917 AATGGTTCATGGCGAAACATATTCAAAATTGATTGACAAATACATTAAGGATGGATCTGA 64976 || | ||| ||||| ||||| | ||||| | |||| | || ||| | | Sbjct 74428 AAACATACATTCGGAAACTTATTCTTTGCTTATTGATACATACGTCAAAGATCCTCATCA 74369 Query 64977 AAAGAAGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATG 65036 | || || | || || || || |||| | || ||| | || | || || | || Sbjct 74368 ACGGACTCACCTTTTCGAGGCAATTGAAACCATCCCTTGTGTCAAGCACAAAGCCGACTG 74309 Query 65037 GGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTG 65095 ||| | |||||| ||| | || || || || || || |||||||| | || |||| Sbjct 74308 GGCTCTTAAATGGATTGCCGACGAACAGTCA-TCTTTTGCGGAGCGCCTCATAGCATTTG 74250 Query 65096 CGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGC 65155 | || || || || || |||||||| |||||| ||||| | |||||||||||| | Sbjct 74249 CTGCAGTTGAAGGCATATTTTTCTCCGGATCATTCGCAGCTATATTTTGGTTGAAGAAAC 74190 Query 65156 GGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGG 65210 | || |||||||| ||| | ||||| ||||| |||||| || |||||||| Sbjct 74189 GAGGACTCATGCCTGGCTTGACATTCTCTAATGAGCTTATTAGTCGTGATGAGGG 74135 Score = 86.0 bits (94), Expect = 7e-12 Identities = 333/512 (65%), Gaps = 11/512 (2%) Strand=Plus/Plus Query 64713 TTGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAA 64769 |||||| || ||||| | ||| | ||||| ||||| | |||||| | | || | || Sbjct 75679 TTGGACCGCCGAAGAGATGGATCTTTCCAAGGATCTACATGACTGGCACAACCGTCTCAA 75738 Query 64770 TGAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAAT 64829 || || ||| | ||||| | | || || ||||| || | ||| ||||| || Sbjct 75739 CGACAACGAACGTCATTTCATCTCTCATGTTCTCGCGTTCTTCGCAGCGTCTGATGGGAT 75798 Query 64830 TGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 ||| |||||| || | | | ||| | | ||||| || | |||||||| | Sbjct 75799 AGTTAATGAGAACCTCCTTGAGAGGTTTTCAAACGAAGTCCAAGTTGCGGAAGCGCGTTG 75858 Query 64890 ATTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | ||| || ||| ||| |||| ||| || || || | | | Sbjct 75859 TTTCTACGGTTTCCAAATT-ATGATGGAAAACATTCACTCCGAGACCTACTCCCTACTCA 75917 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAA-AGAAGCAGTTATTTGAAGCCATCCAAACT 65007 | |||| ||||| || |||| | ||| |||| || || || |||||| | || Sbjct 75918 TCGACACTTACATCAAAGATGCCACGGAACGAGAATATCTT-TTCGACGCCATCGAGACC 75976 Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066 | || ||||| || ||||| | ||||| || ||| | | ||||| ||| Sbjct 75977 ATTCCCTGTATAAAGCGAAAGGCTGACTGGGCCCTGCGGTGGATATCCGACAAACATTCG 76036 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 | |||| || || | | || || || ||| || || ||||| ||||| || || Sbjct 76037 A-CATTCGGTGAACGGTTGGTGGCCTTCGCCGCTGTCGAAGGCATCTTTTTCTCTGGATC 76095 Query 65127 ATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185 |||| ||| | || | |||||||||||||| ||||||||||| ||| | ||| |||| Sbjct 76096 ATTC-GCGTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCTGGCTTGACCTTTTCAA 76154 Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || ||||| || ||||||||| | ||| Sbjct 76155 ACGAGCTTATCAGTCGCGATGAGGGTATGCAC 76186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595906781345920