Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq5859 127 3e-24 >seq5859 Length=97331 Score = 127 bits (140), Expect = 3e-24 Identities = 361/554 (65%), Gaps = 5/554 (1%) Strand=Plus/Minus Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 || ||||| ||||| ||||| | ||| ||||| | || | ||||| ||| || Sbjct 76203 AAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAAAAGGTC 76144 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || || ||||| | ||| | || || | ||| || || || ||||| | ||| || Sbjct 76143 AAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCAGAGAAA 76084 Query 18275 AATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTC 18334 || || || || || ||||| || | || | |||| | || | | | ||| || Sbjct 76083 AAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGTTTG-TC 76025 Query 18335 AG-TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGC 18393 | |||||| | ||||| || | | ||||| || || |||| || || Sbjct 76024 GGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCGATGGC 75965 Query 18394 ATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATA 18453 | || | || ||| ||| ||| |||||| || ||||||||||| | | || || Sbjct 75964 GTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGGGAGTA 75905 Query 18454 CATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGG 18513 | || || || ||| ||||||| || || |||| || || | | || || | Sbjct 75904 GGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACGCGCTTCCGC 75845 Query 18514 ATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573 | ||| | ||| | |||| || || | | |||||||||||||| || |||| | Sbjct 75844 AACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCAGACGC 75785 Query 18574 TGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA---TTGTT 18630 |||||| || || | ||||| |||||||| ||| || || |||||| |||| Sbjct 75784 TGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGGTTGTG 75725 Query 18631 CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690 ||| |||| || ||| || || ||||| | ||||| | |||||||| || | || || Sbjct 75724 CCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGCCTCTGC 75665 Query 18691 CTGTTTGTACATTT 18704 || ||| ||||||| Sbjct 75664 CTTTTTATACATTT 75651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731058853614400