Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq5859 89.7 9e-13 >seq5859 Length=97331 Score = 89.7 bits (98), Expect = 9e-13 Identities = 123/171 (72%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 38837 GTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAATTCAT 38896 |||||| || || | || ||||| || || || || |||| | ||| || | || ||| Sbjct 73777 GTATTCGGATACCCTCTTCTCGAAGAAATTGGTCTTCCCTTGAAGTGAGATCATATCCAT 73836 Query 38897 AAAATCAAATGGATTTTTGGTATTATAATATTTTTC---TCCTATCAATACATATAATAA 38953 |||||| ||||||||| | | |||||| || ||||| ||| | ||||| | || Sbjct 73837 AAAATCGAATGGATTTGTTGCATTATAGTACTTTTCATTTCCAAGGGATACA---AGTAG 73893 Query 38954 TCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACC 39004 | |||||||||||| |||| |||||| |||| ||| | |||||| || Sbjct 73894 GCGATCGGCCACAAACTCAATATATTGACACATCAATACTGCATTCATGCC 73944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904130348647200