Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq12687 116 1e-20 seq25801 84.2 6e-11 >seq12687 Length=10992 Score = 116 bits (128), Expect = 1e-20 Identities = 207/296 (70%), Gaps = 12/296 (4%) Strand=Plus/Minus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 ||||||| | ||| | ||| || | | ||||| | ||||||||| |||||||| || Sbjct 4679 TCATAACACACCATCACGTCCTCGAGAGCCTTGACAAGACGACGCTGGATATAACCCGTC 4620 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 | || || ||||| |||||||| ||||| |||||||| |||| ||||||||||| Sbjct 4619 TCGGCAGTCTTGACAGCCGTATCAATCAGACCCTCACGACCAGCCATGGCATGGAAGAAG 4560 Query 302674 AGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | ||||| || ||| ||||| | || | | || | |||||||| || || || ||||| Sbjct 4559 AACTCTTGTGG-CGTCAGCCCACGAAGATACGAATTTTCAACGAAGCCGCGAGCTTCGGG 4501 Query 302733 ---CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789 ||||||| |||||| ||||| || || || | | ||||| | ||||| Sbjct 4500 ACTGAAATCGTC---CTTGGTGAAGTGAGGAAGTGTACGATGGCGGAAGCCGAACGGGAT 4444 Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCCCAGGC--ACGAAATCATCTGCGAAATATT 302843 || || || || ||||||| |||| | ||| | ||| ||||| ||||| Sbjct 4443 CCGACGACCTTCCACACTCTGCTGACCCACACAGACGGA--CATTTGCGAGATATT 4390 >seq25801 Length=13206 Score = 84.2 bits (92), Expect = 6e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 233275 ACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTTGA 233334 ||| || | ||||||||||||||||||||| || |||| || || ||||||||| Sbjct 6773 ACCATGGGAAATCATACAATCACGTTCCATCTCTCCAAATCGTAGGCCACCATCACGACT 6714 Query 233335 CCTACCCTGGACTGTTTGACGAGTTAAAA-CAGTTCTTGGACCCTGAGCACGATAATTAA 233393 |||||||| ||||| || | || |||| | | | |||||| |||||| ||| | Sbjct 6713 CCTACCCTCGACTGGCTGCCTTGTCAAAATCTGGAC-AGGACCCCTCGCACGAGAATGTA 6655 Query 233394 TTTTATCTTTAACCATATGCTTCAGTCT 233421 ||||||| | ||||| || || ||||| Sbjct 6654 TTTTATCATCCACCATGTGTTTAAGTCT 6627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470141455481908