Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq14965 132 4e-26 seq9834 105 6e-18 >seq14965 Length=33111 Score = 132 bits (146), Expect = 4e-26 Identities = 157/209 (75%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || ||||| || |||||||| ||| | | Sbjct 8277 ATGCAGATCTTCGTGAAGACATTGACAGGGAAGACTATCACCCTCGAAGTGGAATCATCA 8218 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| | || |||||| || || ||||| || ||||| ||||| Sbjct 8217 GACACCATCGACAACGTTAAAGCGAA-GATCCAGGATAAGGAAGGTATCCCTCCGGATCA 8159 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || |||||||||||||||||||| || ||||||| | | | | | ||||| || || Sbjct 8158 GCAGCGTTTGATCTTTGCCGGGAAGCAATTGGAGGACGGGCGCACCCTTTCAGACTACAA 8099 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 || || |||||||| ||||| || |||| Sbjct 8098 TATCCAGAAGGAATCAACACTGCATCTTG 8070 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || | || || || ||||| ||| | || ||||| | | Sbjct 8049 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTAGAGTCTTCG 7990 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| || || || || ||||| || Sbjct 7989 GACACGATTGACAATGTCAAGGCGAAGATTCAAGACAAGGAGGGTATTCCACCCGACCAG 7930 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || || ||||| || |||| || | | | | | || ||||||||| Sbjct 7929 CAACGTCTCATTTTCGCTGGGAAGCAATTGGAAGACGGGCGCACCCTTTCTGATTATAAC 7870 Query 24884 ATTCAAAAGGAA 24895 || || |||||| Sbjct 7869 ATCCAGAAGGAA 7858 >seq9834 Length=29888 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| || || || || || || || || || || | | Sbjct 369 ATGCAAATCTTCGTCAAGACGCTGACAGGAAAGACCATCACCCTTGAGGTCGAGTCTTCG 310 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| |||||||| ||||||||||| Sbjct 309 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 250 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||| || || || || ||||| || ||| | | | || ||||| ||| Sbjct 249 CAACGCTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACTCTCTCTGATTACAAC 190 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || || | || ||||| |||| || ||| Sbjct 189 ATCCAGAAGGAGTCTACCCTTCATCTCGTTTTGCGTCTGCGTGGCGGC 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449397741271520